RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 PDE6BP35913 854 aa31.43■■■□□ 2.62
RAB40C-209ENST00000565511 MAPK8IP3Q9UPT6 1336 aa31.43■■■□□ 2.62
RAB40C-209ENST00000565511 HLFQ16534 295 aa31.42■■■□□ 2.62
RAB40C-209ENST00000565511 NUP98P52948 1817 aa31.42■■■□□ 2.62
RAB40C-209ENST00000565511 CLEC4GQ6UXB4 293 aa31.41■■■□□ 2.62
RAB40C-209ENST00000565511 C21orf2O43822 256 aa31.4■■■□□ 2.62
RAB40C-209ENST00000565511 PNISRQ8TF01 805 aaKnown RBP31.4■■■□□ 2.62
RAB40C-209ENST00000565511 TOMM70O94826 608 aa31.39■■■□□ 2.62
RAB40C-209ENST00000565511 LMNB1P20700 586 aa31.39■■■□□ 2.62
RAB40C-209ENST00000565511 ST5P78524 1137 aa31.39■■■□□ 2.62
RAB40C-209ENST00000565511 DICER1Q9UPY3 1922 aaKnown RBP31.39■■■□□ 2.62
RAB40C-209ENST00000565511 SRGNP10124 158 aa31.38■■■□□ 2.61
RAB40C-209ENST00000565511 NBPF5PQ86XG9 351 aaPredicted RBP31.38■■■□□ 2.61
RAB40C-209ENST00000565511 NIP7Q9Y221 180 aaKnown RBP eCLIP31.38■■■□□ 2.61
RAB40C-209ENST00000565511 NPHP1O15259 732 aa31.37■■■□□ 2.61
RAB40C-209ENST00000565511 NGEFQ8N5V2 710 aa31.37■■■□□ 2.61
RAB40C-209ENST00000565511 PDZRN3Q9UPQ7 1066 aa31.37■■■□□ 2.61
RAB40C-209ENST00000565511 ZNF652Q9Y2D9 606 aa31.37■■■□□ 2.61
RAB40C-209ENST00000565511 MYBBP1AQ9BQG0 1328 aaKnown RBP31.36■■■□□ 2.61
RAB40C-209ENST00000565511 FAM177BA6PVY3 158 aa31.36■■■□□ 2.61
RAB40C-209ENST00000565511 TTLL7Q6ZT98 887 aa31.36■■■□□ 2.61
RAB40C-209ENST00000565511 RRAGCQ9HB90 399 aa31.36■■■□□ 2.61
RAB40C-209ENST00000565511 KDM2BQ8NHM5 1336 aa31.35■■■□□ 2.61
RAB40C-209ENST00000565511 STYK1Q6J9G0 422 aa31.35■■■□□ 2.61
RAB40C-209ENST00000565511 PRPF40BQ6NWY9 871 aaKnown RBP31.35■■■□□ 2.61
RAB40C-209ENST00000565511 RIPK4P57078 832 aa31.34■■■□□ 2.61
RAB40C-209ENST00000565511 PNNQ9H307 717 aaKnown RBP31.34■■■□□ 2.61
RAB40C-209ENST00000565511 RRP7AQ9Y3A4 280 aaKnown RBP31.34■■■□□ 2.61
RAB40C-209ENST00000565511 ZC3H4Q9UPT8 1303 aaKnown RBP31.33■■■□□ 2.61
RAB40C-209ENST00000565511 RGL2O15211 777 aa31.33■■■□□ 2.61
RAB40C-209ENST00000565511 CCDC146Q8IYE0 955 aa31.33■■■□□ 2.61
RAB40C-209ENST00000565511 ABCC12Q96J65 1359 aa31.32■■■□□ 2.6
RAB40C-209ENST00000565511 TMPOP42166 694 aaKnown RBP31.32■■■□□ 2.6
RAB40C-209ENST00000565511 MASTLQ96GX5 879 aa31.32■■■□□ 2.6
RAB40C-209ENST00000565511 MYL6BP14649 208 aa31.31■■■□□ 2.6
RAB40C-209ENST00000565511 RBM46Q8TBY0 533 aaKnown RBP31.31■■■□□ 2.6
RAB40C-209ENST00000565511 TSPYL4Q9UJ04 414 aa31.31■■■□□ 2.6
RAB40C-209ENST00000565511 MAP3K15Q6ZN16 1313 aa31.3■■■□□ 2.6
RAB40C-209ENST00000565511 WDR90Q96KV7 1748 aa31.3■■■□□ 2.6
RAB40C-209ENST00000565511 KLRG2A4D1S0 409 aaPredicted RBP31.3■■■□□ 2.6
RAB40C-209ENST00000565511 CNKSR1Q969H4 720 aa31.3■■■□□ 2.6
RAB40C-209ENST00000565511 GLTPD2A6NH11 291 aa31.28■■■□□ 2.6
RAB40C-209ENST00000565511 LRP10Q7Z4F1 713 aa31.28■■■□□ 2.6
RAB40C-209ENST00000565511 C7orf43Q8WVR3 580 aa31.28■■■□□ 2.6
RAB40C-209ENST00000565511 UBN2Q6ZU65 1347 aa31.27■■■□□ 2.6
RAB40C-209ENST00000565511 OLFM4Q6UX06 510 aa31.27■■■□□ 2.6
RAB40C-209ENST00000565511 ZBTB3Q9H5J0 574 aa31.27■■■□□ 2.6
RAB40C-209ENST00000565511 LTBP3Q9NS15 1303 aa31.26■■■□□ 2.6
RAB40C-209ENST00000565511 PDIA6Q15084 440 aa31.26■■■□□ 2.59
RAB40C-209ENST00000565511 PROSER3Q2NL68 480 aa31.26■■■□□ 2.59
RAB40C-209ENST00000565511 TPTE2Q6XPS3 522 aa31.26■■■□□ 2.59
RAB40C-209ENST00000565511 NUTM1Q86Y26 1132 aa31.26■■■□□ 2.59
RAB40C-209ENST00000565511 ERVV-1B6SEH8 477 aa31.25■■■□□ 2.59
RAB40C-209ENST00000565511 NPR1P16066 1061 aa31.25■■■□□ 2.59
RAB40C-209ENST00000565511 C16orf71Q8IYS4 520 aaPredicted RBP31.25■■■□□ 2.59
RAB40C-209ENST00000565511 TAOK3Q9H2K8 898 aa31.25■■■□□ 2.59
RAB40C-209ENST00000565511 POTECB2RU33 542 aa31.24■■■□□ 2.59
RAB40C-209ENST00000565511 ANXA1P04083 346 aa31.24■■■□□ 2.59
RAB40C-209ENST00000565511 GPTP24298 496 aa31.24■■■□□ 2.59
RAB40C-209ENST00000565511 APLP1P51693 650 aa31.23■■■□□ 2.59
RAB40C-209ENST00000565511 HTRA3P83110 453 aa31.23■■■□□ 2.59
RAB40C-209ENST00000565511 NEUROD2Q15784 382 aa31.23■■■□□ 2.59
RAB40C-209ENST00000565511 TRIM35Q9UPQ4 493 aa31.23■■■□□ 2.59
RAB40C-209ENST00000565511 KRT24Q2M2I5 525 aa31.22■■■□□ 2.59
RAB40C-209ENST00000565511 ERFEQ4G0M1 354 aa31.22■■■□□ 2.59
RAB40C-209ENST00000565511 KIF6Q6ZMV9 814 aa31.22■■■□□ 2.59
RAB40C-209ENST00000565511 ERBB4Q15303 1308 aa31.22■■■□□ 2.59
RAB40C-209ENST00000565511 EIF2S2P20042 333 aaKnown RBP31.21■■■□□ 2.59
RAB40C-209ENST00000565511 SLC51AQ86UW1 340 aa31.2■■■□□ 2.59
RAB40C-209ENST00000565511 ADAMTS8Q9UP79 889 aa31.2■■■□□ 2.59
RAB40C-209ENST00000565511 SNED1Q8TER0 1413 aa31.19■■■□□ 2.58
RAB40C-209ENST00000565511 FSTL1Q12841 308 aa31.19■■■□□ 2.58
RAB40C-209ENST00000565511 SUSD4Q5VX71 490 aa31.19■■■□□ 2.58
RAB40C-209ENST00000565511 ZNF34Q8IZ26 560 aa31.19■■■□□ 2.58
RAB40C-209ENST00000565511 DNAJC5GQ8N7S2 189 aa31.19■■■□□ 2.58
RAB40C-209ENST00000565511 PRKRIP1Q9H875 184 aaPredicted RBP31.19■■■□□ 2.58
RAB40C-209ENST00000565511 ANKRD36CQ5JPF3 1778 aa31.18■■■□□ 2.58
RAB40C-209ENST00000565511 LMOD3Q0VAK6 560 aa31.18■■■□□ 2.58
RAB40C-209ENST00000565511 NECTIN2Q92692 538 aa31.18■■■□□ 2.58
RAB40C-209ENST00000565511 RUNDC1Q96C34 613 aa31.18■■■□□ 2.58
RAB40C-209ENST00000565511 IBTKQ9P2D0 1353 aaPredicted RBP31.17■■■□□ 2.58
RAB40C-209ENST00000565511 CRY2Q49AN0 593 aa31.17■■■□□ 2.58
RAB40C-209ENST00000565511 CCDC93Q567U6 631 aa31.17■■■□□ 2.58
RAB40C-209ENST00000565511 BABAM1Q9NWV8 329 aa31.17■■■□□ 2.58
RAB40C-209ENST00000565511 RIC1Q4ADV7 1423 aa31.16■■■□□ 2.58
RAB40C-209ENST00000565511 NTSR2O95665 410 aa31.16■■■□□ 2.58
RAB40C-209ENST00000565511 VEGFAP15692 232 aaPredicted RBP31.16■■■□□ 2.58
RAB40C-209ENST00000565511 GTF2E1P29083 439 aaPredicted RBP31.16■■■□□ 2.58
RAB40C-209ENST00000565511 WDR43Q15061 677 aaKnown RBP eCLIP31.16■■■□□ 2.58
RAB40C-209ENST00000565511 SOGA3Q5TF21 947 aa31.16■■■□□ 2.58
RAB40C-209ENST00000565511 GIGYF2Q6Y7W6 1299 aaKnown RBP31.16■■■□□ 2.58
RAB40C-209ENST00000565511 C3orf67Q6ZVT6 689 aa31.16■■■□□ 2.58
RAB40C-209ENST00000565511 CHL1O00533 1208 aa31.15■■■□□ 2.58
RAB40C-209ENST00000565511 NYXQ9GZU5 481 aa31.15■■■□□ 2.58
RAB40C-209ENST00000565511 ZNF277Q9NRM2 450 aaPredicted RBP31.14■■■□□ 2.58
RAB40C-209ENST00000565511 SMC1BQ8NDV3 1235 aa31.13■■■□□ 2.57
RAB40C-209ENST00000565511 LAMB2P55268 1798 aa31.12■■■□□ 2.57
RAB40C-209ENST00000565511 DDNO94850 711 aaPredicted RBP31.12■■■□□ 2.57
RAB40C-209ENST00000565511 FKBP4Q02790 459 aaKnown RBP eCLIP31.12■■■□□ 2.57
RAB40C-209ENST00000565511 LAS1LQ9Y4W2 734 aaKnown RBP31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms