RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
SPG7-211ENST00000565370 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
SPG7-211ENST00000565370 MYL6BP14649 208 aa16.01■□□□□ 0.15
SPG7-211ENST00000565370 COL11A2P13942 1736 aaPredicted RBP16.01■□□□□ 0.15
SPG7-211ENST00000565370 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
SPG7-211ENST00000565370 CHL1O00533 1208 aa16■□□□□ 0.15
SPG7-211ENST00000565370 EIF2S2P20042 333 aaKnown RBP16■□□□□ 0.15
SPG7-211ENST00000565370 CHRNA5P30532 468 aa16■□□□□ 0.15
SPG7-211ENST00000565370 PDE6BP35913 854 aa16■□□□□ 0.15
SPG7-211ENST00000565370 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
SPG7-211ENST00000565370 NBPF5PQ86XG9 351 aaPredicted RBP16■□□□□ 0.15
SPG7-211ENST00000565370 NGEFQ8N5V2 710 aa16■□□□□ 0.15
SPG7-211ENST00000565370 CFAP44Q96MT7 982 aa16■□□□□ 0.15
SPG7-211ENST00000565370 NIP7Q9Y221 180 aaKnown RBP eCLIP16■□□□□ 0.15
SPG7-211ENST00000565370 NUP98P52948 1817 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 H0YIN7 160 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 HOXB7P09629 217 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 C2CD5Q86YS7 1000 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 IFT57Q9NWB7 429 aa15.99■□□□□ 0.15
SPG7-211ENST00000565370 GNAI1P63096 354 aa15.98■□□□□ 0.15
SPG7-211ENST00000565370 ADCY9O60503 1353 aa15.98■□□□□ 0.15
SPG7-211ENST00000565370 KCNA3P22001 575 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 HDGFL1Q5TGJ6 251 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 ANKRD36CQ5JPF3 1778 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 ARFGEF2Q9Y6D5 1785 aa15.97■□□□□ 0.15
SPG7-211ENST00000565370 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
SPG7-211ENST00000565370 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
SPG7-211ENST00000565370 TPTE2Q6XPS3 522 aa15.96■□□□□ 0.15
SPG7-211ENST00000565370 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.15
SPG7-211ENST00000565370 TTLL6Q8N841 843 aa15.96■□□□□ 0.15
SPG7-211ENST00000565370 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
SPG7-211ENST00000565370 MBIPQ9NS73 344 aa15.96■□□□□ 0.15
SPG7-211ENST00000565370 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
SPG7-211ENST00000565370 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
SPG7-211ENST00000565370 GPBP1L1Q9HC44 474 aaPredicted RBP15.95■□□□□ 0.14
SPG7-211ENST00000565370 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
SPG7-211ENST00000565370 HSPA6P17066 643 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 HLFQ16534 295 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPG7-211ENST00000565370 CHMP4AQ9BY43 222 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
SPG7-211ENST00000565370 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
SPG7-211ENST00000565370 ZNF853P0CG23 659 aa15.93■□□□□ 0.14
SPG7-211ENST00000565370 KRT24Q2M2I5 525 aa15.93■□□□□ 0.14
SPG7-211ENST00000565370 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
SPG7-211ENST00000565370 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
SPG7-211ENST00000565370 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
SPG7-211ENST00000565370 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
SPG7-211ENST00000565370 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 PDIA6Q15084 440 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
SPG7-211ENST00000565370 PARP10Q53GL7 1025 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 STYK1Q6J9G0 422 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
SPG7-211ENST00000565370 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
SPG7-211ENST00000565370 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
SPG7-211ENST00000565370 ANXA1P04083 346 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 GPTP24298 496 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 LRP10Q7Z4F1 713 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 PPP1R42Q7Z4L9 355 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
SPG7-211ENST00000565370 SRGNP10124 158 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 NPR1P16066 1061 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 AIMP1Q12904 312 aaKnown RBP15.9■□□□□ 0.14
SPG7-211ENST00000565370 SOGA3Q5TF21 947 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 HYPKQ9NX55 129 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 IL16Q14005 1332 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 RNF123Q5XPI4 1314 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
SPG7-211ENST00000565370 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
SPG7-211ENST00000565370 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
SPG7-211ENST00000565370 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
SPG7-211ENST00000565370 RNF181Q9P0P0 153 aa15.89■□□□□ 0.13
SPG7-211ENST00000565370 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
SPG7-211ENST00000565370 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
SPG7-211ENST00000565370 ZNF34Q8IZ26 560 aa15.88■□□□□ 0.13
SPG7-211ENST00000565370 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
SPG7-211ENST00000565370 ZC3H4Q9UPT8 1303 aaKnown RBP15.88■□□□□ 0.13
SPG7-211ENST00000565370 SBF1O95248 1867 aa15.87■□□□□ 0.13
SPG7-211ENST00000565370 NTSR2O95665 410 aa15.87■□□□□ 0.13
SPG7-211ENST00000565370 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
SPG7-211ENST00000565370 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
SPG7-211ENST00000565370 FER1L6Q2WGJ9 1857 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 KIF3CO14782 793 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 RASSF7Q02833 373 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 CCDC30Q5VVM6 783 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
SPG7-211ENST00000565370 RPGRQ92834 1020 aaKnown RBP15.86■□□□□ 0.13
SPG7-211ENST00000565370 TSR2Q969E8 191 aaKnown RBP15.86■□□□□ 0.13
SPG7-211ENST00000565370 UTP14AQ9BVJ6 771 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms