RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 NANOS1Q8WY41 292 aaKnown RBP6.68□□□□□ -1.34
CAPN3-214ENST00000565274 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
CAPN3-214ENST00000565274 KIF7Q2M1P5 1343 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 RNF123Q5XPI4 1314 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 INSRP06213 1382 aa6.68□□□□□ -1.34
CAPN3-214ENST00000565274 DHX29Q7Z478 1369 aaKnown RBP6.68□□□□□ -1.34
CAPN3-214ENST00000565274 PLB1Q6P1J6 1458 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 RALGAPBQ86X10 1494 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 RNF225M0QZC1 329 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-214ENST00000565274 AP1G2O75843 785 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 IRS1P35568 1242 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 PTK2Q05397 1052 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 SPTY2D1Q68D10 685 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-214ENST00000565274 CCDC82Q8N4S0 544 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 CHMP7Q8WUX9 453 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-214ENST00000565274 CROCC2H7BZ55 1655 aa6.67□□□□□ -1.34
CAPN3-214ENST00000565274 PATL2C9JE40 543 aaKnown RBP6.66□□□□□ -1.34
CAPN3-214ENST00000565274 MARSP56192 900 aaKnown RBP6.66□□□□□ -1.34
CAPN3-214ENST00000565274 CNGB1Q14028 1251 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-214ENST00000565274 FAM9BQ8IZU0 186 aa6.66□□□□□ -1.34
CAPN3-214ENST00000565274 OCSTAMPQ9BR26 566 aa6.66□□□□□ -1.34
CAPN3-214ENST00000565274 DZIP3Q86Y13 1208 aaKnown RBP6.65□□□□□ -1.34
CAPN3-214ENST00000565274 ZNF784Q8NCA9 323 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-214ENST00000565274 RNF217Q8TC41 542 aa6.65□□□□□ -1.34
CAPN3-214ENST00000565274 EPS8L1Q8TE68 723 aa6.65□□□□□ -1.34
CAPN3-214ENST00000565274 WASHC2CQ9Y4E1 1318 aa6.65□□□□□ -1.35
CAPN3-214ENST00000565274 C9orf84Q5VXU9 1444 aa6.65□□□□□ -1.35
CAPN3-214ENST00000565274 SMG6Q86US8 1419 aaKnown RBP6.65□□□□□ -1.35
CAPN3-214ENST00000565274 ATP10AO60312 1499 aa6.65□□□□□ -1.35
CAPN3-214ENST00000565274 KIF14Q15058 1648 aa6.65□□□□□ -1.35
CAPN3-214ENST00000565274 SKIV2LQ15477 1246 aaKnown RBP6.64□□□□□ -1.35
CAPN3-214ENST00000565274 GPAT2Q6NUI2 795 aa6.64□□□□□ -1.35
CAPN3-214ENST00000565274 PRDM4Q9UKN5 801 aa6.64□□□□□ -1.35
CAPN3-214ENST00000565274 GPRASP1Q5JY77 1395 aa6.64□□□□□ -1.35
CAPN3-214ENST00000565274 USP47Q96K76 1375 aa6.64□□□□□ -1.35
CAPN3-214ENST00000565274 MAST1Q9Y2H9 1570 aa6.64□□□□□ -1.35
CAPN3-214ENST00000565274 SENP3-EIF4A1A0A087X0R7 540 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 ADH1AP07327 375 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 TSPY4P0CV99 314 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 TSPY10P0CW01 314 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 RHOQP17081 205 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
CAPN3-214ENST00000565274 KDM5CP41229 1560 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-214ENST00000565274 ZMYM4Q5VZL5 1548 aa6.63□□□□□ -1.35
CAPN3-214ENST00000565274 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-214ENST00000565274 NOL8Q76FK4 1167 aaKnown RBP6.63□□□□□ -1.35
CAPN3-214ENST00000565274 ZC3H4Q9UPT8 1303 aaKnown RBP6.63□□□□□ -1.35
CAPN3-214ENST00000565274 PLEKHH2Q8IVE3 1493 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 NUP155O75694 1391 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
CAPN3-214ENST00000565274 ARHGEF15O94989 841 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 ADAMTS2O95450 1211 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 SLURP2P0DP57 97 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 PTGIRP43119 386 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 RALBP1Q15311 655 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 CCDC184Q52MB2 194 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 PRICKLE2Q7Z3G6 844 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 NME8Q8N427 588 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 PNISRQ8TF01 805 aaKnown RBP6.62□□□□□ -1.35
CAPN3-214ENST00000565274 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-214ENST00000565274 MRS2Q9HD23 443 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 HMX1Q9NP08 348 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-214ENST00000565274 CYLDQ9NQC7 956 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
CAPN3-214ENST00000565274 CDC42BPAQ5VT25 1732 aa6.62□□□□□ -1.35
CAPN3-214ENST00000565274 CCDC141Q6ZP82 1450 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 BRD4O60885 1362 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-214ENST00000565274 KIF15Q9NS87 1388 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 SMARCA5O60264 1052 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-214ENST00000565274 LILRA1O75019 489 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 SH3D19Q5HYK7 790 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 AXDND1Q5T1B0 1012 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-214ENST00000565274 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 LYSMD3Q7Z3D4 306 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 FAM117AQ9C073 453 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 IGSF5Q9NSI5 407 aa6.61□□□□□ -1.35
CAPN3-214ENST00000565274 CUEDC1Q9NWM3 386 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-214ENST00000565274 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 TSHZ1Q6ZSZ6 1077 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 ANKRD13AQ8IZ07 590 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.6□□□□□ -1.35
CAPN3-214ENST00000565274 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 GPSM3Q9Y4H4 160 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 LAMC1P11047 1609 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 MAGI2Q86UL8 1455 aa6.6□□□□□ -1.35
CAPN3-214ENST00000565274 BCORL1Q5H9F3 1711 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 SHROOM2Q13796 1616 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 TTC36A6NLP5 189 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 USP17L8P0C7I0 530 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 CDCA8Q53HL2 280 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 PPP2R2DQ66LE6 453 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 NBPF11Q86T75 865 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 KDF1Q8NAX2 398 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-214ENST00000565274 SPATA32Q96LK8 384 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 KDM4CQ9H3R0 1056 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms