RNA–Protein interactions for RNA: ENST00000564744.1

RPL4-208, Transcript of ribosomal protein L4, human

TSL 2

Gene RPL4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPL4-208	ENST00000564744	LRP10	Q7Z4F1	713 aa		10.93	□□□□□ -0.66
RPL4-208	ENST00000564744	FLAD1	Q8NFF5	587 aa		10.93	□□□□□ -0.66
RPL4-208	ENST00000564744	STK31	Q9BXU1	1019 aa		10.93	□□□□□ -0.66
RPL4-208	ENST00000564744	ZBTB3	Q9H5J0	574 aa		10.93	□□□□□ -0.66
RPL4-208	ENST00000564744	PHAX	Q9H814	394 aa	Known RBP	10.93	□□□□□ -0.66
RPL4-208	ENST00000564744	CAMTA2	O94983	1202 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	GYS1	P13807	737 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	FKBP8	Q14318	412 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	KIF6	Q6ZMV9	814 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	BICDL1	Q6ZP65	573 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	COPS6	Q7L5N1	327 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	ZNF428	Q96B54	188 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	BCL2L12	Q9HB09	334 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	DBF4	Q9UBU7	674 aa	Predicted RBP	10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	NARF	Q9UHQ1	456 aa		10.92	□□□□□ -0.66
RPL4-208	ENST00000564744	SLC4A2	P04920	1241 aa		10.91	□□□□□ -0.66
RPL4-208	ENST00000564744	HLF	Q16534	295 aa		10.91	□□□□□ -0.66
RPL4-208	ENST00000564744	MAP3K15	Q6ZN16	1313 aa		10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	SSH1	Q8WYL5	1049 aa		10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	MTFR1L	Q9H019	292 aa		10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	SMC4	Q9NTJ3	1288 aa		10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	RNF216	Q9NWF9	866 aa	Predicted RBP	10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	HYPK	Q9NX55	129 aa		10.9	□□□□□ -0.66
RPL4-208	ENST00000564744	FAM177B	A6PVY3	158 aa		10.89	□□□□□ -0.67
RPL4-208	ENST00000564744	GPT	P24298	496 aa		10.89	□□□□□ -0.67
RPL4-208	ENST00000564744	TBC1D9B	Q66K14	1250 aa		10.89	□□□□□ -0.67
RPL4-208	ENST00000564744	MRPL50	Q8N5N7	158 aa	Known RBP	10.89	□□□□□ -0.67
RPL4-208	ENST00000564744	LRP5	O75197	1615 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	MMP10	P09238	476 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	DDR1	Q08345	913 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	FLII	Q13045	1269 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	NFIX	Q14938	502 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	RIC3	Q7Z5B4	369 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	KLHL34	Q8N239	644 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	SLC16A10	Q8TF71	515 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	SPON1	Q9HCB6	807 aa		10.88	□□□□□ -0.67
RPL4-208	ENST00000564744	ANKRD31	Q8N7Z5	1873 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	NRXN2	Q9P2S2	1712 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744		F6X3S4	739 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	BCAR3	O75815	825 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	PTGER2	P43116	358 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	RARS	P54136	660 aa	Known RBP	10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	FKBP5	Q13451	457 aa	Predicted RBP	10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	CCDC24	Q8N4L8	307 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	PLBD2	Q8NHP8	589 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	CHMP4A	Q9BY43	222 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	MAP3K2	Q9Y2U5	619 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	ADCY9	O60503	1353 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	CACNA1S	Q13698	1873 aa		10.87	□□□□□ -0.67
RPL4-208	ENST00000564744	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	ATP5J2-PTCD1	G3V325	749 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	POLD1	P28340	1107 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	ANKRD13D	Q6ZTN6	518 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	NLGN1	Q8N2Q7	840 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	MYD88	Q99836	296 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	ZNF652	Q9Y2D9	606 aa		10.86	□□□□□ -0.67
RPL4-208	ENST00000564744	UBN2	Q6ZU65	1347 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	LAMB2	P55268	1798 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	PI4KAP2	A4QPH2	592 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	ERVV-1	B6SEH8	477 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	POLRMT	O00411	1230 aa	Known RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	DDX58	O95786	925 aa	Known RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	CT47B1	P0C2W7	299 aa	Predicted RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	TM4SF1	P30408	202 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	ALDH1L2	Q3SY69	923 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	PI4KAP1	Q8N8J0	262 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	SGIP1	Q9BQI5	828 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	TNN	Q9UQP3	1299 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	PARP3	Q9Y6F1	533 aa		10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.85	□□□□□ -0.67
RPL4-208	ENST00000564744	ATP10D	Q9P241	1426 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	COL11A2	P13942	1736 aa	Predicted RBP	10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	KIF13B	Q9NQT8	1826 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	SERPINB2	P05120	415 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	KSR2	Q6VAB6	950 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	PPP4R3CP	Q6ZMV5	832 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	FRAT1	Q92837	279 aa	Predicted RBP	10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	SETDB2	Q96T68	719 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	NOB1	Q9ULX3	412 aa	Known RBP	10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	CARMIL3	Q8ND23	1372 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	DDX60	Q8IY21	1712 aa	Known RBP	10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	KIAA1551	Q9HCM1	1747 aa		10.84	□□□□□ -0.67
RPL4-208	ENST00000564744	NPHP1	O15259	732 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	TCIRG1	Q13488	830 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	SUSD4	Q5VX71	490 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	SLC4A10	Q6U841	1118 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	CLEC4G	Q6UXB4	293 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	ZNF34	Q8IZ26	560 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	DNAAF4	Q8WXU2	420 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	JARID2	Q92833	1246 aa	Predicted RBP	10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	METTL22	Q9BUU2	404 aa	Predicted RBP	10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	RCAN3	Q9UKA8	241 aa		10.83	□□□□□ -0.68
RPL4-208	ENST00000564744	ABCC12	Q96J65	1359 aa		10.82	□□□□□ -0.68
RPL4-208	ENST00000564744	CWF19L2	Q2TBE0	894 aa	Known RBP	10.82	□□□□□ -0.68
RPL4-208	ENST00000564744	HSP90AB3P	Q58FF7	597 aa		10.82	□□□□□ -0.68
RPL4-208	ENST00000564744	RTL5	Q5HYW3	569 aa	Predicted RBP	10.82	□□□□□ -0.68
RPL4-208	ENST00000564744	NLRP10	Q86W26	655 aa		10.82	□□□□□ -0.68

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