RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 GLRX3O76003 335 aaKnown RBP18.47■□□□□ 0.55
HERC2-207ENST00000564734 TMEM63CQ9P1W3 806 aa18.47■□□□□ 0.55
HERC2-207ENST00000564734 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
HERC2-207ENST00000564734 RBSNQ9H1K0 784 aa18.46■□□□□ 0.55
HERC2-207ENST00000564734 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
HERC2-207ENST00000564734 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
HERC2-207ENST00000564734 HYPKQ9NX55 129 aa18.46■□□□□ 0.55
HERC2-207ENST00000564734 PDIA6Q15084 440 aa18.45■□□□□ 0.54
HERC2-207ENST00000564734 RASEFQ8IZ41 740 aa18.45■□□□□ 0.54
HERC2-207ENST00000564734 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
HERC2-207ENST00000564734 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
HERC2-207ENST00000564734 CWF19L2Q2TBE0 894 aaKnown RBP18.45■□□□□ 0.54
HERC2-207ENST00000564734 TRIM44Q96DX7 344 aaPredicted RBP18.45■□□□□ 0.54
HERC2-207ENST00000564734 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
HERC2-207ENST00000564734 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
HERC2-207ENST00000564734 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
HERC2-207ENST00000564734 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
HERC2-207ENST00000564734 CWC27Q6UX04 472 aaKnown RBP18.43■□□□□ 0.54
HERC2-207ENST00000564734 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
HERC2-207ENST00000564734 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 MBD3O95983 291 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 PA2G4Q9UQ80 394 aaKnown RBP18.43■□□□□ 0.54
HERC2-207ENST00000564734 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
HERC2-207ENST00000564734 OS9Q13438 667 aaPredicted RBP18.43■□□□□ 0.54
HERC2-207ENST00000564734 LRSAM1Q6UWE0 723 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 KCNB2Q92953 911 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
HERC2-207ENST00000564734 SLAIN2Q9P270 581 aa18.42■□□□□ 0.54
HERC2-207ENST00000564734 ERBB3P21860 1342 aa18.42■□□□□ 0.54
HERC2-207ENST00000564734 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
HERC2-207ENST00000564734 GRM8O00222 908 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 AK2P54819 239 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 RUFY3Q7L099 469 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
HERC2-207ENST00000564734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
HERC2-207ENST00000564734 WDR33Q9C0J8 1336 aaKnown RBP18.41■□□□□ 0.54
HERC2-207ENST00000564734 SASH1O94885 1247 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 KIAA1211Q6ZU35 1233 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 ALS2Q96Q42 1657 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 PTH1RQ03431 593 aa18.4■□□□□ 0.54
HERC2-207ENST00000564734 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
HERC2-207ENST00000564734 IGKV5-2P06315 115 aa18.39■□□□□ 0.53
HERC2-207ENST00000564734 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
HERC2-207ENST00000564734 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
HERC2-207ENST00000564734 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
HERC2-207ENST00000564734 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
HERC2-207ENST00000564734 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
HERC2-207ENST00000564734 BICC1Q9H694 974 aaKnown RBP18.39■□□□□ 0.53
HERC2-207ENST00000564734 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
HERC2-207ENST00000564734 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.53
HERC2-207ENST00000564734 SYCE3A1L190 88 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 GPATCH3Q96I76 525 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 AACSQ86V21 672 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 TMEM87AQ8NBN3 555 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 C5P01031 1676 aa18.38■□□□□ 0.53
HERC2-207ENST00000564734 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
HERC2-207ENST00000564734 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
HERC2-207ENST00000564734 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
HERC2-207ENST00000564734 TM6SF1Q9BZW5 370 aa18.37■□□□□ 0.53
HERC2-207ENST00000564734 SCN11AQ9UI33 1791 aa18.37■□□□□ 0.53
HERC2-207ENST00000564734 ZSWIM6Q9HCJ5 1215 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 MRC1P22897 1456 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 HS1BP3Q53T59 392 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 AIMP1Q12904 312 aaKnown RBP18.36■□□□□ 0.53
HERC2-207ENST00000564734 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 ZSCAN30Q86W11 494 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 ABCC6O95255 1503 aa18.36■□□□□ 0.53
HERC2-207ENST00000564734 GADD45BO75293 160 aaPredicted RBP18.35■□□□□ 0.53
HERC2-207ENST00000564734 CPA1P15085 419 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 PHKG2P15735 406 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
HERC2-207ENST00000564734 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 LRP10Q7Z4F1 713 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 LARGE1O95461 756 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
HERC2-207ENST00000564734 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
HERC2-207ENST00000564734 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
HERC2-207ENST00000564734 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
HERC2-207ENST00000564734 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
HERC2-207ENST00000564734 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
HERC2-207ENST00000564734 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
HERC2-207ENST00000564734 LARP6Q9BRS8 491 aaKnown RBP18.34■□□□□ 0.53
HERC2-207ENST00000564734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.535e-7■■■■■ 27.7
HERC2-207ENST00000564734 CCDC171Q6TFL3 1326 aa18.34■□□□□ 0.53
HERC2-207ENST00000564734 COL18A1P39060 1754 aa18.34■□□□□ 0.53
HERC2-207ENST00000564734 SYT1P21579 422 aa18.34■□□□□ 0.53
HERC2-207ENST00000564734 MEGF6O75095 1541 aa18.33■□□□□ 0.53
HERC2-207ENST00000564734 GCKRQ14397 625 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms