RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 ZNF496Q96IT1 587 aaPredicted RBP11.61□□□□□ -0.55
LINC01858-201ENST00000564534 TNS1Q9HBL0 1735 aaKnown RBP11.61□□□□□ -0.55
LINC01858-201ENST00000564534 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
LINC01858-201ENST00000564534 SIK1P57059 783 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
LINC01858-201ENST00000564534 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
LINC01858-201ENST00000564534 HEG1Q9ULI3 1381 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 PLSCR1O15162 318 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 HOXB7P09629 217 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
LINC01858-201ENST00000564534 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
LINC01858-201ENST00000564534 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
LINC01858-201ENST00000564534 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
LINC01858-201ENST00000564534 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
LINC01858-201ENST00000564534 BAG6P46379 1132 aa11.59□□□□□ -0.55
LINC01858-201ENST00000564534 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
LINC01858-201ENST00000564534 ZNF710Q8N1W2 664 aa11.59□□□□□ -0.55
LINC01858-201ENST00000564534 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
LINC01858-201ENST00000564534 RIMBP2O15034 1052 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 CCNL1Q9UK58 526 aaPredicted RBP11.58□□□□□ -0.56
LINC01858-201ENST00000564534 LY75O60449 1722 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 RGPD3A6NKT7 1758 aaPredicted RBP11.58□□□□□ -0.56
LINC01858-201ENST00000564534 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 ZNF831Q5JPB2 1677 aa11.58□□□□□ -0.56
LINC01858-201ENST00000564534 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.56
LINC01858-201ENST00000564534 STARD3NLO95772 234 aa11.57□□□□□ -0.56
LINC01858-201ENST00000564534 TMEM92Q6UXU6 159 aa11.57□□□□□ -0.56
LINC01858-201ENST00000564534 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
LINC01858-201ENST00000564534 TSPYL6Q8N831 410 aa11.57□□□□□ -0.56
LINC01858-201ENST00000564534 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
LINC01858-201ENST00000564534 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 DNAJC10Q8IXB1 793 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 CICQ96RK0 1608 aaPredicted RBP11.56□□□□□ -0.56
LINC01858-201ENST00000564534 C5P01031 1676 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 VAMP4O75379 141 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 EIF2S2P20042 333 aaKnown RBP11.56□□□□□ -0.56
LINC01858-201ENST00000564534 TXNRD1Q16881 649 aa11.56□□□□□ -0.56
LINC01858-201ENST00000564534 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
LINC01858-201ENST00000564534 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
LINC01858-201ENST00000564534 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
LINC01858-201ENST00000564534 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC01858-201ENST00000564534 USP16Q9Y5T5 823 aa11.55□□□□□ -0.56
LINC01858-201ENST00000564534 TJP1Q07157 1748 aa11.55□□□□□ -0.56
LINC01858-201ENST00000564534 ITPK1Q13572 414 aa11.54□□□□□ -0.56
LINC01858-201ENST00000564534 CAMKK2Q96RR4 588 aa11.54□□□□□ -0.56
LINC01858-201ENST00000564534 STK31Q9BXU1 1019 aa11.54□□□□□ -0.56
LINC01858-201ENST00000564534 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
LINC01858-201ENST00000564534 CYP19A1P11511 503 aaPredicted RBP11.53□□□□□ -0.56
LINC01858-201ENST00000564534 KCNQ4P56696 695 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 DEFB132Q7Z7B7 95 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 PPP1R37O75864 691 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
LINC01858-201ENST00000564534 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
LINC01858-201ENST00000564534 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 LRRC4BQ9NT99 713 aa11.53□□□□□ -0.56
LINC01858-201ENST00000564534 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
LINC01858-201ENST00000564534 COL5A3P25940 1745 aaPredicted RBP11.53□□□□□ -0.56
LINC01858-201ENST00000564534 CNTNAP4Q9C0A0 1308 aa11.52□□□□□ -0.56
LINC01858-201ENST00000564534 CRKLP46109 303 aaKnown RBP11.52□□□□□ -0.57
LINC01858-201ENST00000564534 EMP3P54852 163 aa11.52□□□□□ -0.57
LINC01858-201ENST00000564534 NPM2Q86SE8 214 aaKnown RBP11.52□□□□□ -0.57
LINC01858-201ENST00000564534 CCDC87Q9NVE4 849 aa11.52□□□□□ -0.57
LINC01858-201ENST00000564534 TAF1LQ8IZX4 1826 aa11.52□□□□□ -0.57
LINC01858-201ENST00000564534 RC3H1Q5TC82 1133 aaKnown RBP11.51□□□□□ -0.57
LINC01858-201ENST00000564534 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 AK7Q96M32 723 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 DDX21Q9NR30 783 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01858-201ENST00000564534 SMC4Q9NTJ3 1288 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 CHPF2Q9P2E5 772 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 RCAN3Q9UKA8 241 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 C4BP0C0L5 1744 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 A1BGP04217 495 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
LINC01858-201ENST00000564534 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
LINC01858-201ENST00000564534 RREB1Q92766 1687 aa11.5□□□□□ -0.57
LINC01858-201ENST00000564534 MYL6BP14649 208 aa11.5□□□□□ -0.57
LINC01858-201ENST00000564534 CANXP27824 592 aaKnown RBP11.5□□□□□ -0.57
LINC01858-201ENST00000564534 INTS5Q6P9B9 1019 aaKnown RBP11.5□□□□□ -0.57
LINC01858-201ENST00000564534 SSH1Q8WYL5 1049 aa11.5□□□□□ -0.57
LINC01858-201ENST00000564534 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
LINC01858-201ENST00000564534 CACNA1FO60840 1977 aa11.5□□□□□ -0.57
LINC01858-201ENST00000564534 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
LINC01858-201ENST00000564534 GNPATO15228 680 aa11.49□□□□□ -0.57
LINC01858-201ENST00000564534 IL6STP40189 918 aaPredicted RBP11.49□□□□□ -0.57
LINC01858-201ENST00000564534 BCL2L13Q9BXK5 485 aa11.49□□□□□ -0.57
LINC01858-201ENST00000564534 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
LINC01858-201ENST00000564534 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
LINC01858-201ENST00000564534 PDIA6Q15084 440 aa11.49□□□□□ -0.57
LINC01858-201ENST00000564534 NBPF14Q5TI25 921 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms