RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
RNF40-206ENST00000564260 BCORQ6W2J9 1755 aa21.46■■□□□ 1.03
RNF40-206ENST00000564260 MSL1Q68DK7 614 aa21.46■■□□□ 1.03
RNF40-206ENST00000564260 BCL2L12Q9HB09 334 aa21.46■■□□□ 1.03
RNF40-206ENST00000564260 PARP3Q9Y6F1 533 aa21.46■■□□□ 1.03
RNF40-206ENST00000564260 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
RNF40-206ENST00000564260 PIP4K2AP48426 406 aaPredicted RBP21.45■■□□□ 1.02
RNF40-206ENST00000564260 HSP90AB3PQ58FF7 597 aa21.45■■□□□ 1.02
RNF40-206ENST00000564260 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
RNF40-206ENST00000564260 CARMIL3Q8ND23 1372 aa21.45■■□□□ 1.02
RNF40-206ENST00000564260 ATP10DQ9P241 1426 aa21.45■■□□□ 1.02
RNF40-206ENST00000564260 DDX58O95786 925 aaKnown RBP21.43■■□□□ 1.02
RNF40-206ENST00000564260 NFIXQ14938 502 aa21.43■■□□□ 1.02
RNF40-206ENST00000564260 PROSER3Q2NL68 480 aa21.43■■□□□ 1.02
RNF40-206ENST00000564260 GIGYF2Q6Y7W6 1299 aaKnown RBP21.43■■□□□ 1.02
RNF40-206ENST00000564260 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
RNF40-206ENST00000564260 SETDB2Q96T68 719 aa21.43■■□□□ 1.02
RNF40-206ENST00000564260 POLRMTO00411 1230 aaKnown RBP21.42■■□□□ 1.02
RNF40-206ENST00000564260 PLBD2Q8NHP8 589 aa21.42■■□□□ 1.02
RNF40-206ENST00000564260 XAGE3Q8WTP9 111 aa21.42■■□□□ 1.02
RNF40-206ENST00000564260 NECTIN2Q92692 538 aa21.42■■□□□ 1.02
RNF40-206ENST00000564260 IBTKQ9P2D0 1353 aaPredicted RBP21.42■■□□□ 1.02
RNF40-206ENST00000564260 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
RNF40-206ENST00000564260 ANKRD13DQ6ZTN6 518 aa21.41■■□□□ 1.02
RNF40-206ENST00000564260 CDCA7LQ96GN5 454 aa21.4■■□□□ 1.02
RNF40-206ENST00000564260 RNF123Q5XPI4 1314 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 DDR1Q08345 913 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 ALDH1L2Q3SY69 923 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 TBC1D9BQ66K14 1250 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
RNF40-206ENST00000564260 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
RNF40-206ENST00000564260 ANXA1P04083 346 aa21.38■■□□□ 1.01
RNF40-206ENST00000564260 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
RNF40-206ENST00000564260 NYXQ9GZU5 481 aa21.38■■□□□ 1.01
RNF40-206ENST00000564260 SERPINB2P05120 415 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 TGFB2P61812 414 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 ZNF34Q8IZ26 560 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 FHDC1Q9C0D6 1143 aaPredicted RBP21.37■■□□□ 1.01
RNF40-206ENST00000564260 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 NIP7Q9Y221 180 aaKnown RBP eCLIP21.37■■□□□ 1.01
RNF40-206ENST00000564260 CACNA1FO60840 1977 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 NRXN2Q9P2S2 1712 aa21.37■■□□□ 1.01
RNF40-206ENST00000564260 AIMP1Q12904 312 aaKnown RBP21.36■■□□□ 1.01
RNF40-206ENST00000564260 TRIM28Q13263 835 aaKnown RBP21.36■■□□□ 1.01
RNF40-206ENST00000564260 TCIRG1Q13488 830 aa21.36■■□□□ 1.01
RNF40-206ENST00000564260 HLFQ16534 295 aa21.36■■□□□ 1.01
RNF40-206ENST00000564260 TPTE2Q6XPS3 522 aa21.36■■□□□ 1.01
RNF40-206ENST00000564260 SYT17Q9BSW7 474 aa21.36■■□□□ 1.01
RNF40-206ENST00000564260 BRPF1P55201 1214 aaPredicted RBP21.34■■□□□ 1.01
RNF40-206ENST00000564260 FLIIQ13045 1269 aa21.34■■□□□ 1.01
RNF40-206ENST00000564260 KSR2Q6VAB6 950 aa21.34■■□□□ 1.01
RNF40-206ENST00000564260 PPP1R42Q7Z4L9 355 aa21.34■■□□□ 1.01
RNF40-206ENST00000564260 RIC3Q7Z5B4 369 aa21.34■■□□□ 1.01
RNF40-206ENST00000564260 CNBD1Q8NA66 436 aa21.34■■□□□ 1.01
RNF40-206ENST00000564260 RIC1Q4ADV7 1423 aa21.33■■□□□ 1.01
RNF40-206ENST00000564260 ST5P78524 1137 aa21.33■■□□□ 1.01
RNF40-206ENST00000564260 NBPF5PQ86XG9 351 aaPredicted RBP21.33■■□□□ 1.01
RNF40-206ENST00000564260 PHAXQ9H814 394 aaKnown RBP21.33■■□□□ 1.01
RNF40-206ENST00000564260 KIF13BQ9NQT8 1826 aa21.32■■□□□ 1
RNF40-206ENST00000564260 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
RNF40-206ENST00000564260 BRIP1Q9BX63 1249 aa21.32■■□□□ 1
RNF40-206ENST00000564260 PTPRCP08575 1304 aa21.31■■□□□ 1
RNF40-206ENST00000564260 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
RNF40-206ENST00000564260 NUP98P52948 1817 aa21.31■■□□□ 1
RNF40-206ENST00000564260 PDE6BP35913 854 aa21.3■■□□□ 1
RNF40-206ENST00000564260 NEXNQ0ZGT2 675 aa21.3■■□□□ 1
RNF40-206ENST00000564260 PRR5LQ6MZQ0 368 aa21.3■■□□□ 1
RNF40-206ENST00000564260 METTL22Q9BUU2 404 aaPredicted RBP21.3■■□□□ 1
RNF40-206ENST00000564260 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
RNF40-206ENST00000564260 NPHP1O15259 732 aa21.29■■□□□ 1
RNF40-206ENST00000564260 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
RNF40-206ENST00000564260 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
RNF40-206ENST00000564260 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
RNF40-206ENST00000564260 ADCY9O60503 1353 aa21.28■■□□□ 1
RNF40-206ENST00000564260 PI4KAP2A4QPH2 592 aa21.28■■□□□ 1
RNF40-206ENST00000564260 NLRP10Q86W26 655 aa21.28■■□□□ 1
RNF40-206ENST00000564260 PI4KAP1Q8N8J0 262 aa21.28■■□□□ 1
RNF40-206ENST00000564260 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
RNF40-206ENST00000564260 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
RNF40-206ENST00000564260 ANKRD36CQ5JPF3 1778 aa21.28■■□□□ 1
RNF40-206ENST00000564260 KLRG2A4D1S0 409 aaPredicted RBP21.27■■□□□ 1
RNF40-206ENST00000564260 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
RNF40-206ENST00000564260 MRPL50Q8N5N7 158 aaKnown RBP21.27■■□□□ 1
RNF40-206ENST00000564260 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
RNF40-206ENST00000564260 KIF16BQ96L93 1317 aa21.27■□□□□ 0.99
RNF40-206ENST00000564260 ARFGEF2Q9Y6D5 1785 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 NTSR2O95665 410 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 GPTP24298 496 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 G2E3Q7L622 706 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 DNAAF4Q8WXU2 420 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 AFDNP55196 1824 aaKnown RBP21.26■□□□□ 0.99
RNF40-206ENST00000564260 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
RNF40-206ENST00000564260 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
RNF40-206ENST00000564260 TCERG1O14776 1098 aaKnown RBP21.25■□□□□ 0.99
RNF40-206ENST00000564260 RARSP54136 660 aaKnown RBP21.25■□□□□ 0.99
RNF40-206ENST00000564260 SLC10A5Q5PT55 438 aa21.25■□□□□ 0.99
RNF40-206ENST00000564260 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
RNF40-206ENST00000564260 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
RNF40-206ENST00000564260 SMC4Q9NTJ3 1288 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms