RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 HTRA3P83110 453 aa24.44■■□□□ 1.5
SYNGR3-203ENST00000563869 SLC39A6Q13433 755 aa24.44■■□□□ 1.5
SYNGR3-203ENST00000563869 RRAGCQ9HB90 399 aa24.44■■□□□ 1.5
SYNGR3-203ENST00000563869 SALL2Q9Y467 1007 aaPredicted RBP24.44■■□□□ 1.5
SYNGR3-203ENST00000563869 CACNA1FO60840 1977 aa24.43■■□□□ 1.5
SYNGR3-203ENST00000563869 ZPR1O75312 459 aa24.43■■□□□ 1.5
SYNGR3-203ENST00000563869 NRXN2Q9P2S2 1712 aa24.42■■□□□ 1.5
SYNGR3-203ENST00000563869 USPL1Q5W0Q7 1092 aa24.42■■□□□ 1.5
SYNGR3-203ENST00000563869 ZNF496Q96IT1 587 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-203ENST00000563869 DLEC1Q9Y238 1755 aa24.42■■□□□ 1.5
SYNGR3-203ENST00000563869 ZC3H4Q9UPT8 1303 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-203ENST00000563869 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-203ENST00000563869 DNAJC10Q8IXB1 793 aa24.41■■□□□ 1.5
SYNGR3-203ENST00000563869 MBIPQ9NS73 344 aa24.41■■□□□ 1.5
SYNGR3-203ENST00000563869 SMC1BQ8NDV3 1235 aa24.39■■□□□ 1.49
SYNGR3-203ENST00000563869 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
SYNGR3-203ENST00000563869 CYP19A1P11511 503 aaPredicted RBP24.38■■□□□ 1.49
SYNGR3-203ENST00000563869 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-203ENST00000563869 NARFQ9UHQ1 456 aa24.38■■□□□ 1.49
SYNGR3-203ENST00000563869 NFIXQ14938 502 aa24.37■■□□□ 1.49
SYNGR3-203ENST00000563869 MIS18AQ9NYP9 233 aa24.37■■□□□ 1.49
SYNGR3-203ENST00000563869 CT47B1P0C2W7 299 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-203ENST00000563869 RASSF7Q02833 373 aa24.36■■□□□ 1.49
SYNGR3-203ENST00000563869 ZNF428Q96B54 188 aa24.36■■□□□ 1.49
SYNGR3-203ENST00000563869 COL15A1P39059 1388 aa24.36■■□□□ 1.49
SYNGR3-203ENST00000563869 CCDC88AQ3V6T2 1871 aa24.36■■□□□ 1.49
SYNGR3-203ENST00000563869 FANCIQ9NVI1 1328 aa24.35■■□□□ 1.49
SYNGR3-203ENST00000563869 LMNB1P20700 586 aa24.35■■□□□ 1.49
SYNGR3-203ENST00000563869 COL13A1Q5TAT6 717 aaPredicted RBP24.35■■□□□ 1.49
SYNGR3-203ENST00000563869 SLFN5Q08AF3 891 aa24.34■■□□□ 1.49
SYNGR3-203ENST00000563869 TIAM2Q8IVF5 1701 aa24.34■■□□□ 1.49
SYNGR3-203ENST00000563869 GLTPD2A6NH11 291 aa24.33■■□□□ 1.49
SYNGR3-203ENST00000563869 SERPINB2P05120 415 aa24.33■■□□□ 1.49
SYNGR3-203ENST00000563869 BCL2L12Q9HB09 334 aa24.33■■□□□ 1.49
SYNGR3-203ENST00000563869 ZBTB1Q9Y2K1 713 aa24.33■■□□□ 1.49
SYNGR3-203ENST00000563869 KCNQ3O43525 872 aa24.32■■□□□ 1.48
SYNGR3-203ENST00000563869 VEGFAP15692 232 aaPredicted RBP24.32■■□□□ 1.48
SYNGR3-203ENST00000563869 PRELPP51888 382 aa24.32■■□□□ 1.48
SYNGR3-203ENST00000563869 TTLL6Q8N841 843 aa24.32■■□□□ 1.48
SYNGR3-203ENST00000563869 DUSP27Q5VZP5 1158 aa24.3■■□□□ 1.48
SYNGR3-203ENST00000563869 A0A087WZG4 1122 aa24.29■■□□□ 1.48
SYNGR3-203ENST00000563869 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
SYNGR3-203ENST00000563869 C2CD5Q86YS7 1000 aa24.29■■□□□ 1.48
SYNGR3-203ENST00000563869 TSR2Q969E8 191 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-203ENST00000563869 H0YIN7 160 aa24.28■■□□□ 1.48
SYNGR3-203ENST00000563869 IL6STP40189 918 aaPredicted RBP24.28■■□□□ 1.48
SYNGR3-203ENST00000563869 TWISTNBQ3B726 338 aaPredicted RBP24.28■■□□□ 1.48
SYNGR3-203ENST00000563869 TRMT2AQ8IZ69 625 aaKnown RBP24.28■■□□□ 1.48
SYNGR3-203ENST00000563869 HDGFL1Q5TGJ6 251 aa24.27■■□□□ 1.48
SYNGR3-203ENST00000563869 STK31Q9BXU1 1019 aa24.27■■□□□ 1.48
SYNGR3-203ENST00000563869 DBF4Q9UBU7 674 aaPredicted RBP24.27■■□□□ 1.48
SYNGR3-203ENST00000563869 CARMIL3Q8ND23 1372 aa24.27■■□□□ 1.48
SYNGR3-203ENST00000563869 NFKBIEO00221 500 aa24.26■■□□□ 1.47
SYNGR3-203ENST00000563869 ANKRD31Q8N7Z5 1873 aa24.26■■□□□ 1.47
SYNGR3-203ENST00000563869 DICER1Q9UPY3 1922 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-203ENST00000563869 RGL2O15211 777 aa24.25■■□□□ 1.47
SYNGR3-203ENST00000563869 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-203ENST00000563869 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
SYNGR3-203ENST00000563869 EIF5P55010 431 aaKnown RBP24.24■■□□□ 1.47
SYNGR3-203ENST00000563869 TNS4Q8IZW8 715 aa24.24■■□□□ 1.47
SYNGR3-203ENST00000563869 EXOSC9Q06265 439 aaKnown RBP24.23■■□□□ 1.47
SYNGR3-203ENST00000563869 HYPKQ9NX55 129 aa24.23■■□□□ 1.47
SYNGR3-203ENST00000563869 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
SYNGR3-203ENST00000563869 FER1L6Q2WGJ9 1857 aa24.23■■□□□ 1.47
SYNGR3-203ENST00000563869 PCNTO95613 3336 aa24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 SCN7AQ01118 1682 aa24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 EIF2S2P20042 333 aaKnown RBP24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 BICDL1Q6ZP65 573 aa24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 C8orf58Q8NAV2 365 aa24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
SYNGR3-203ENST00000563869 POTECB2RU33 542 aa24.21■■□□□ 1.47
SYNGR3-203ENST00000563869 DPY19L2Q6NUT2 758 aa24.21■■□□□ 1.47
SYNGR3-203ENST00000563869 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
SYNGR3-203ENST00000563869 COL11A2P13942 1736 aaPredicted RBP24.21■■□□□ 1.47
SYNGR3-203ENST00000563869 CDCA7LQ96GN5 454 aa24.2■■□□□ 1.46
SYNGR3-203ENST00000563869 CAPN15O75808 1086 aa24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 HSPA1AP0DMV8 641 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 HSPA1BP0DMV9 641 aaKnown RBP24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 PDE6BP35913 854 aa24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 TBC1D9BQ66K14 1250 aa24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 BRIP1Q9BX63 1249 aa24.19■■□□□ 1.46
SYNGR3-203ENST00000563869 VAMP4O75379 141 aa24.18■■□□□ 1.46
SYNGR3-203ENST00000563869 ALDH1L2Q3SY69 923 aa24.18■■□□□ 1.46
SYNGR3-203ENST00000563869 ZNF622Q969S3 477 aaKnown RBP eCLIP24.18■■□□□ 1.46
SYNGR3-203ENST00000563869 ELL2O00472 640 aaPredicted RBP24.17■■□□□ 1.46
SYNGR3-203ENST00000563869 ZNF652Q9Y2D9 606 aa24.17■■□□□ 1.46
SYNGR3-203ENST00000563869 PRAMEF22A3QJZ6 481 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 C21orf2O43822 256 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 DDX58O95786 925 aaKnown RBP24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 A1BGP04217 495 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 ERFEQ4G0M1 354 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 KIF6Q6ZMV9 814 aa24.16■■□□□ 1.46
SYNGR3-203ENST00000563869 KRT24Q2M2I5 525 aa24.15■■□□□ 1.46
SYNGR3-203ENST00000563869 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
SYNGR3-203ENST00000563869 YTHDC1Q96MU7 727 aaKnown RBP24.15■■□□□ 1.46
SYNGR3-203ENST00000563869 CACNA1SQ13698 1873 aa24.15■■□□□ 1.46
SYNGR3-203ENST00000563869 LTBP3Q9NS15 1303 aa24.14■■□□□ 1.46
SYNGR3-203ENST00000563869 ARFGEF2Q9Y6D5 1785 aa24.14■■□□□ 1.46
SYNGR3-203ENST00000563869 ZNF219Q9P2Y4 722 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms