RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 FAM177BA6PVY3 158 aa23.25■■□□□ 1.31
NME3-205ENST00000563854 TMPOP42166 694 aaKnown RBP23.25■■□□□ 1.31
NME3-205ENST00000563854 NBPF5PQ86XG9 351 aaPredicted RBP23.25■■□□□ 1.31
NME3-205ENST00000563854 ZNF219Q9P2Y4 722 aaPredicted RBP23.25■■□□□ 1.31
NME3-205ENST00000563854 MYL6BP14649 208 aa23.24■■□□□ 1.31
NME3-205ENST00000563854 LMOD3Q0VAK6 560 aa23.24■■□□□ 1.31
NME3-205ENST00000563854 CLEC4GQ6UXB4 293 aa23.23■■□□□ 1.31
NME3-205ENST00000563854 NIP7Q9Y221 180 aaKnown RBP eCLIP23.23■■□□□ 1.31
NME3-205ENST00000563854 KIF3CO14782 793 aa23.21■■□□□ 1.31
NME3-205ENST00000563854 HLFQ16534 295 aa23.21■■□□□ 1.31
NME3-205ENST00000563854 PRKRIP1Q9H875 184 aaPredicted RBP23.21■■□□□ 1.31
NME3-205ENST00000563854 NMRK2Q9NPI5 230 aa23.21■■□□□ 1.31
NME3-205ENST00000563854 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
NME3-205ENST00000563854 KIF6Q6ZMV9 814 aa23.2■■□□□ 1.3
NME3-205ENST00000563854 RUNDC1Q96C34 613 aa23.2■■□□□ 1.3
NME3-205ENST00000563854 CACNA1SQ13698 1873 aa23.19■■□□□ 1.3
NME3-205ENST00000563854 C21orf2O43822 256 aa23.19■■□□□ 1.3
NME3-205ENST00000563854 LAS1LQ9Y4W2 734 aaKnown RBP23.19■■□□□ 1.3
NME3-205ENST00000563854 SBF1O95248 1867 aa23.18■■□□□ 1.3
NME3-205ENST00000563854 EIF2S2P20042 333 aaKnown RBP23.18■■□□□ 1.3
NME3-205ENST00000563854 TTLL7Q6ZT98 887 aa23.18■■□□□ 1.3
NME3-205ENST00000563854 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
NME3-205ENST00000563854 LMNB1P20700 586 aa23.17■■□□□ 1.3
NME3-205ENST00000563854 GTF2E1P29083 439 aaPredicted RBP23.17■■□□□ 1.3
NME3-205ENST00000563854 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
NME3-205ENST00000563854 ZBTB3Q9H5J0 574 aa23.17■■□□□ 1.3
NME3-205ENST00000563854 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 KDM2BQ8NHM5 1336 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 NFKBIEO00221 500 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 SRGNP10124 158 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 STYK1Q6J9G0 422 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 CNKSR1Q969H4 720 aa23.16■■□□□ 1.3
NME3-205ENST00000563854 RGL2O15211 777 aa23.15■■□□□ 1.3
NME3-205ENST00000563854 PRELPP51888 382 aa23.15■■□□□ 1.3
NME3-205ENST00000563854 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
NME3-205ENST00000563854 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
NME3-205ENST00000563854 TIAM2Q8IVF5 1701 aa23.14■■□□□ 1.3
NME3-205ENST00000563854 GPTP24298 496 aa23.14■■□□□ 1.29
NME3-205ENST00000563854 C16orf71Q8IYS4 520 aaPredicted RBP23.14■■□□□ 1.29
NME3-205ENST00000563854 ERBB4Q15303 1308 aa23.13■■□□□ 1.29
NME3-205ENST00000563854 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
NME3-205ENST00000563854 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
NME3-205ENST00000563854 NUP98P52948 1817 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 SLX4Q8IY92 1834 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 ANXA1P04083 346 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
NME3-205ENST00000563854 NPR1P16066 1061 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 HSPA6P17066 643 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
NME3-205ENST00000563854 KRT24Q2M2I5 525 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 ARFGEF2Q9Y6D5 1785 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 ABCC12Q96J65 1359 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 CCDC88AQ3V6T2 1871 aa23.11■■□□□ 1.29
NME3-205ENST00000563854 TNRC6CQ9HCJ0 1690 aaKnown RBP23.1■■□□□ 1.29
NME3-205ENST00000563854 TOMM70O94826 608 aa23.1■■□□□ 1.29
NME3-205ENST00000563854 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
NME3-205ENST00000563854 NYXQ9GZU5 481 aa23.1■■□□□ 1.29
NME3-205ENST00000563854 RRAGCQ9HB90 399 aa23.1■■□□□ 1.29
NME3-205ENST00000563854 TAOK3Q9H2K8 898 aa23.09■■□□□ 1.29
NME3-205ENST00000563854 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
NME3-205ENST00000563854 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
NME3-205ENST00000563854 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.29
NME3-205ENST00000563854 CHL1O00533 1208 aa23.08■■□□□ 1.29
NME3-205ENST00000563854 ERFEQ4G0M1 354 aa23.08■■□□□ 1.29
NME3-205ENST00000563854 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
NME3-205ENST00000563854 PDIA6Q15084 440 aa23.07■■□□□ 1.28
NME3-205ENST00000563854 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
NME3-205ENST00000563854 SUSD4Q5VX71 490 aa23.06■■□□□ 1.28
NME3-205ENST00000563854 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
NME3-205ENST00000563854 KLRG2A4D1S0 409 aaPredicted RBP23.05■■□□□ 1.28
NME3-205ENST00000563854 GLTPD2A6NH11 291 aa23.05■■□□□ 1.28
NME3-205ENST00000563854 APAF1O14727 1248 aa23.05■■□□□ 1.28
NME3-205ENST00000563854 CCDC93Q567U6 631 aa23.05■■□□□ 1.28
NME3-205ENST00000563854 LRP10Q7Z4F1 713 aa23.05■■□□□ 1.28
NME3-205ENST00000563854 COPS6Q7L5N1 327 aa23.04■■□□□ 1.28
NME3-205ENST00000563854 ZNF34Q8IZ26 560 aa23.04■■□□□ 1.28
NME3-205ENST00000563854 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
NME3-205ENST00000563854 LTBP3Q9NS15 1303 aa23.04■■□□□ 1.28
NME3-205ENST00000563854 IBTKQ9P2D0 1353 aaPredicted RBP23.03■■□□□ 1.28
NME3-205ENST00000563854 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
NME3-205ENST00000563854 OLFM4Q6UX06 510 aa23.03■■□□□ 1.28
NME3-205ENST00000563854 RBM46Q8TBY0 533 aaKnown RBP23.03■■□□□ 1.28
NME3-205ENST00000563854 RPGRQ92834 1020 aaKnown RBP23.03■■□□□ 1.28
NME3-205ENST00000563854 NTSR2O95665 410 aa23.02■■□□□ 1.28
NME3-205ENST00000563854 ALDH1B1P30837 517 aa23.02■■□□□ 1.28
NME3-205ENST00000563854 PPP1R42Q7Z4L9 355 aa23.02■■□□□ 1.28
NME3-205ENST00000563854 CHPF2Q9P2E5 772 aa23.02■■□□□ 1.28
NME3-205ENST00000563854 PARP10Q53GL7 1025 aa23.01■■□□□ 1.27
NME3-205ENST00000563854 DPY19L2Q6NUT2 758 aa23.01■■□□□ 1.27
NME3-205ENST00000563854 C7orf43Q8WVR3 580 aa23.01■■□□□ 1.27
NME3-205ENST00000563854 CFAP44Q96MT7 982 aa23.01■■□□□ 1.27
NME3-205ENST00000563854 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
NME3-205ENST00000563854 DICER1Q9UPY3 1922 aaKnown RBP23■■□□□ 1.27
NME3-205ENST00000563854 CCDC184Q52MB2 194 aa23■■□□□ 1.27
NME3-205ENST00000563854 MBIPQ9NS73 344 aa23■■□□□ 1.27
NME3-205ENST00000563854 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
NME3-205ENST00000563854 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms