RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 YBX3P16989 372 aaKnown RBP eCLIP26.33■■□□□ 1.814e-8■■□□□ 14.1
CMTM3-206ENST00000563672 HDGFL1Q5TGJ6 251 aa26.33■■□□□ 1.81
CMTM3-206ENST00000563672 WDR63Q8IWG1 891 aa26.33■■□□□ 1.81
CMTM3-206ENST00000563672 DDX21Q9NR30 783 aaKnown RBP eCLIP26.33■■□□□ 1.81
CMTM3-206ENST00000563672 MAP3K15Q6ZN16 1313 aa26.33■■□□□ 1.81
CMTM3-206ENST00000563672 CARMIL3Q8ND23 1372 aa26.33■■□□□ 1.8
CMTM3-206ENST00000563672 NRXN2Q9P2S2 1712 aa26.32■■□□□ 1.8
CMTM3-206ENST00000563672 ANXA1P04083 346 aa26.32■■□□□ 1.8
CMTM3-206ENST00000563672 PELP1Q8IZL8 1130 aaKnown RBP26.32■■□□□ 1.8
CMTM3-206ENST00000563672 GOLGB1Q14789 3259 aaKnown RBP26.32■■□□□ 1.8
CMTM3-206ENST00000563672 DPEP1P16444 411 aa26.31■■□□□ 1.8
CMTM3-206ENST00000563672 KIF6Q6ZMV9 814 aa26.31■■□□□ 1.8
CMTM3-206ENST00000563672 C8orf58Q8NAV2 365 aa26.31■■□□□ 1.8
CMTM3-206ENST00000563672 KCNA3P22001 575 aa26.3■■□□□ 1.8
CMTM3-206ENST00000563672 TSR2Q969E8 191 aaKnown RBP26.3■■□□□ 1.8
CMTM3-206ENST00000563672 KIAA1551Q9HCM1 1747 aa26.3■■□□□ 1.8
CMTM3-206ENST00000563672 ELL2O00472 640 aaPredicted RBP26.29■■□□□ 1.8
CMTM3-206ENST00000563672 PRR5LQ6MZQ0 368 aa26.29■■□□□ 1.8
CMTM3-206ENST00000563672 CHPF2Q9P2E5 772 aa26.29■■□□□ 1.8
CMTM3-206ENST00000563672 AFDNP55196 1824 aaKnown RBP26.28■■□□□ 1.8
CMTM3-206ENST00000563672 GRIN3BO60391 1043 aa26.28■■□□□ 1.8
CMTM3-206ENST00000563672 ZBTB3Q9H5J0 574 aa26.28■■□□□ 1.8
CMTM3-206ENST00000563672 DBF4Q9UBU7 674 aaPredicted RBP26.28■■□□□ 1.8
CMTM3-206ENST00000563672 NIP7Q9Y221 180 aaKnown RBP eCLIP26.28■■□□□ 1.8
CMTM3-206ENST00000563672 COPS6Q7L5N1 327 aa26.27■■□□□ 1.8
CMTM3-206ENST00000563672 GIGYF2Q6Y7W6 1299 aaKnown RBP26.26■■□□□ 1.79
CMTM3-206ENST00000563672 XAGE3Q8WTP9 111 aa26.26■■□□□ 1.79
CMTM3-206ENST00000563672 WWC3Q9ULE0 1092 aa26.26■■□□□ 1.79
CMTM3-206ENST00000563672 CHRNA5P30532 468 aa26.25■■□□□ 1.79
CMTM3-206ENST00000563672 TSPYL6Q8N831 410 aa26.25■■□□□ 1.79
CMTM3-206ENST00000563672 CNBD1Q8NA66 436 aa26.25■■□□□ 1.79
CMTM3-206ENST00000563672 BRIP1Q9BX63 1249 aa26.25■■□□□ 1.79
CMTM3-206ENST00000563672 ATP10DQ9P241 1426 aa26.24■■□□□ 1.79
CMTM3-206ENST00000563672 NBPF5PQ86XG9 351 aaPredicted RBP26.24■■□□□ 1.79
CMTM3-206ENST00000563672 MIER1Q8N108 512 aa26.24■■□□□ 1.79
CMTM3-206ENST00000563672 HYPKQ9NX55 129 aa26.24■■□□□ 1.79
CMTM3-206ENST00000563672 N4BP2Q86UW6 1770 aaPredicted RBP26.23■■□□□ 1.79
CMTM3-206ENST00000563672 ZNF521Q96K83 1311 aa26.23■■□□□ 1.79
CMTM3-206ENST00000563672 FANCIQ9NVI1 1328 aa26.23■■□□□ 1.79
CMTM3-206ENST00000563672 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
CMTM3-206ENST00000563672 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
CMTM3-206ENST00000563672 CHMP4AQ9BY43 222 aa26.23■■□□□ 1.79
CMTM3-206ENST00000563672 SPINK5Q9NQ38 1064 aaPredicted RBP26.23■■□□□ 1.79
CMTM3-206ENST00000563672 PIM2Q9P1W9 311 aa26.23■■□□□ 1.79
CMTM3-206ENST00000563672 TPTE2Q6XPS3 522 aa26.22■■□□□ 1.79
CMTM3-206ENST00000563672 ZNF34Q8IZ26 560 aa26.22■■□□□ 1.79
CMTM3-206ENST00000563672 PDE6BP35913 854 aa26.2■■□□□ 1.78
CMTM3-206ENST00000563672 ST5P78524 1137 aa26.2■■□□□ 1.78
CMTM3-206ENST00000563672 CCDC30Q5VVM6 783 aa26.2■■□□□ 1.78
CMTM3-206ENST00000563672 BCS1LQ9Y276 419 aa26.2■■□□□ 1.78
CMTM3-206ENST00000563672 UBN2Q6ZU65 1347 aa26.19■■□□□ 1.78
CMTM3-206ENST00000563672 NPHP1O15259 732 aa26.19■■□□□ 1.78
CMTM3-206ENST00000563672 GPTP24298 496 aa26.19■■□□□ 1.78
CMTM3-206ENST00000563672 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
CMTM3-206ENST00000563672 C2CD5Q86YS7 1000 aa26.19■■□□□ 1.78
CMTM3-206ENST00000563672 PDZRN3Q9UPQ7 1066 aa26.19■■□□□ 1.78
CMTM3-206ENST00000563672 H0YIN7 160 aa26.18■■□□□ 1.78
CMTM3-206ENST00000563672 GOLGA2Q08379 1002 aa26.18■■□□□ 1.78
CMTM3-206ENST00000563672 NUP98P52948 1817 aa26.18■■□□□ 1.78
CMTM3-206ENST00000563672 FAM177BA6PVY3 158 aa26.17■■□□□ 1.78
CMTM3-206ENST00000563672 DALRD3Q5D0E6 543 aaKnown RBP26.17■■□□□ 1.78
CMTM3-206ENST00000563672 ANKRD13DQ6ZTN6 518 aa26.17■■□□□ 1.78
CMTM3-206ENST00000563672 PLBD2Q8NHP8 589 aa26.17■■□□□ 1.78
CMTM3-206ENST00000563672 NYXQ9GZU5 481 aa26.17■■□□□ 1.78
CMTM3-206ENST00000563672 MYH16Q9H6N6 1097 aa26.17■■□□□ 1.78
CMTM3-206ENST00000563672 YY1P25490 414 aa26.16■■□□□ 1.78
CMTM3-206ENST00000563672 PARP10Q53GL7 1025 aa26.16■■□□□ 1.78
CMTM3-206ENST00000563672 HSP90AB3PQ58FF7 597 aa26.16■■□□□ 1.78
CMTM3-206ENST00000563672 SUSD4Q5VX71 490 aa26.16■■□□□ 1.78
CMTM3-206ENST00000563672 PHAXQ9H814 394 aaKnown RBP26.16■■□□□ 1.78
CMTM3-206ENST00000563672 IBTKQ9P2D0 1353 aaPredicted RBP26.16■■□□□ 1.78
CMTM3-206ENST00000563672 BRCA1P38398 1863 aaKnown RBP26.15■■□□□ 1.78
CMTM3-206ENST00000563672 EXOSC9Q06265 439 aaKnown RBP26.15■■□□□ 1.78
CMTM3-206ENST00000563672 TCIRG1Q13488 830 aa26.15■■□□□ 1.78
CMTM3-206ENST00000563672 ANKRD31Q8N7Z5 1873 aa26.15■■□□□ 1.78
CMTM3-206ENST00000563672 KLRG2A4D1S0 409 aaPredicted RBP26.14■■□□□ 1.78
CMTM3-206ENST00000563672 VAMP4O75379 141 aa26.13■■□□□ 1.77
CMTM3-206ENST00000563672 NTSR2O95665 410 aa26.13■■□□□ 1.77
CMTM3-206ENST00000563672 SRGNP10124 158 aa26.13■■□□□ 1.77
CMTM3-206ENST00000563672 GTF2E1P29083 439 aaPredicted RBP26.13■■□□□ 1.77
CMTM3-206ENST00000563672 PPP1R42Q7Z4L9 355 aa26.12■■□□□ 1.77
CMTM3-206ENST00000563672 NUTM1Q86Y26 1132 aa26.12■■□□□ 1.77
CMTM3-206ENST00000563672 TTLL6Q8N841 843 aa26.12■■□□□ 1.77
CMTM3-206ENST00000563672 ERFEQ4G0M1 354 aa26.11■■□□□ 1.77
CMTM3-206ENST00000563672 NLRP10Q86W26 655 aa26.11■■□□□ 1.77
CMTM3-206ENST00000563672 ABCC12Q96J65 1359 aa26.1■■□□□ 1.77
CMTM3-206ENST00000563672 TCERG1O14776 1098 aaKnown RBP26.1■■□□□ 1.77
CMTM3-206ENST00000563672 STYK1Q6J9G0 422 aa26.1■■□□□ 1.77
CMTM3-206ENST00000563672 ZNF622Q969S3 477 aaKnown RBP eCLIP26.1■■□□□ 1.77
CMTM3-206ENST00000563672 UTP14AQ9BVJ6 771 aaKnown RBP26.1■■□□□ 1.77
CMTM3-206ENST00000563672 STK31Q9BXU1 1019 aa26.1■■□□□ 1.77
CMTM3-206ENST00000563672 MASTLQ96GX5 879 aa26.09■■□□□ 1.77
CMTM3-206ENST00000563672 ISCA1Q9BUE6 129 aa26.09■■□□□ 1.77
CMTM3-206ENST00000563672 DLEC1Q9Y238 1755 aa26.09■■□□□ 1.77
CMTM3-206ENST00000563672 RIC3Q7Z5B4 369 aa26.08■■□□□ 1.77
CMTM3-206ENST00000563672 CHD4Q14839 1912 aa26.08■■□□□ 1.76
CMTM3-206ENST00000563672 RIC1Q4ADV7 1423 aa26.07■■□□□ 1.76
CMTM3-206ENST00000563672 E9PSI1 815 aa26.07■■□□□ 1.76
CMTM3-206ENST00000563672 SLC4A2P04920 1241 aa26.07■■□□□ 1.76
CMTM3-206ENST00000563672 TRIM28Q13263 835 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms