RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SRGNP10124 158 aa25.01■■□□□ 1.59
NME3-204ENST00000563498 SOGA3Q5TF21 947 aa25.01■■□□□ 1.59
NME3-204ENST00000563498 CLEC4GQ6UXB4 293 aa25■■□□□ 1.59
NME3-204ENST00000563498 MASTLQ96GX5 879 aa25■■□□□ 1.59
NME3-204ENST00000563498 ZNF219Q9P2Y4 722 aaPredicted RBP25■■□□□ 1.59
NME3-204ENST00000563498 NUDCQ9Y266 331 aa25■■□□□ 1.59
NME3-204ENST00000563498 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
NME3-204ENST00000563498 COL13A1Q5TAT6 717 aaPredicted RBP24.99■■□□□ 1.59
NME3-204ENST00000563498 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
NME3-204ENST00000563498 USP16Q9Y5T5 823 aa24.99■■□□□ 1.59
NME3-204ENST00000563498 RGL2O15211 777 aa24.98■■□□□ 1.59
NME3-204ENST00000563498 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
NME3-204ENST00000563498 SNRPA1P09661 255 aaKnown RBP24.97■■□□□ 1.59
NME3-204ENST00000563498 ZNF652Q9Y2D9 606 aa24.97■■□□□ 1.59
NME3-204ENST00000563498 RTF1Q92541 710 aaKnown RBP24.96■■□□□ 1.59
NME3-204ENST00000563498 NBPF5PQ86XG9 351 aaPredicted RBP24.95■■□□□ 1.58
NME3-204ENST00000563498 PCNTO95613 3336 aa24.94■■□□□ 1.58
NME3-204ENST00000563498 PRAMEF22A3QJZ6 481 aa24.94■■□□□ 1.58
NME3-204ENST00000563498 HTATSF1O43719 755 aaKnown RBP24.94■■□□□ 1.58
NME3-204ENST00000563498 U2AF1L5P0DN76 240 aaPredicted RBP24.94■■□□□ 1.58
NME3-204ENST00000563498 U2AF1Q01081 240 aaKnown RBP eCLIP24.94■■□□□ 1.58
NME3-204ENST00000563498 CACNA1SQ13698 1873 aa24.94■■□□□ 1.58
NME3-204ENST00000563498 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
NME3-204ENST00000563498 PIP4K2AP48426 406 aaPredicted RBP24.93■■□□□ 1.58
NME3-204ENST00000563498 MCM10Q7L590 875 aa24.93■■□□□ 1.58
NME3-204ENST00000563498 C7orf43Q8WVR3 580 aa24.93■■□□□ 1.58
NME3-204ENST00000563498 CHADLQ6NUI6 762 aa24.92■■□□□ 1.58
NME3-204ENST00000563498 DDNO94850 711 aaPredicted RBP24.91■■□□□ 1.58
NME3-204ENST00000563498 NPR1P16066 1061 aa24.91■■□□□ 1.58
NME3-204ENST00000563498 PPP2R1AP30153 589 aa24.91■■□□□ 1.58
NME3-204ENST00000563498 TPTE2Q6XPS3 522 aa24.91■■□□□ 1.58
NME3-204ENST00000563498 NBPF26B4DH59 902 aa24.9■■□□□ 1.58
NME3-204ENST00000563498 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
NME3-204ENST00000563498 NBPF10Q6P3W6 841 aaKnown RBP24.9■■□□□ 1.58
NME3-204ENST00000563498 NBPF15Q8N660 670 aa24.9■■□□□ 1.58
NME3-204ENST00000563498 IQCA1LA6NCM1 817 aa24.89■■□□□ 1.58
NME3-204ENST00000563498 HSPA1AP0DMV8 641 aaKnown RBP24.89■■□□□ 1.58
NME3-204ENST00000563498 HSPA1BP0DMV9 641 aaKnown RBP24.89■■□□□ 1.58
NME3-204ENST00000563498 L3MBTL3Q96JM7 780 aaPredicted RBP24.89■■□□□ 1.58
NME3-204ENST00000563498 CREBZFQ9NS37 354 aa24.89■■□□□ 1.58
NME3-204ENST00000563498 TNS4Q8IZW8 715 aa24.88■■□□□ 1.57
NME3-204ENST00000563498 NIP7Q9Y221 180 aaKnown RBP eCLIP24.88■■□□□ 1.57
NME3-204ENST00000563498 SCN4AP35499 1836 aa24.86■■□□□ 1.57
NME3-204ENST00000563498 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
NME3-204ENST00000563498 DCTN1Q14203 1278 aa24.86■■□□□ 1.57
NME3-204ENST00000563498 TAF7Q15545 349 aaPredicted RBP24.86■■□□□ 1.57
NME3-204ENST00000563498 POTEIP0CG38 1075 aa24.85■■□□□ 1.57
NME3-204ENST00000563498 POTEJP0CG39 1038 aa24.85■■□□□ 1.57
NME3-204ENST00000563498 RTKN2Q8IZC4 609 aa24.85■■□□□ 1.57
NME3-204ENST00000563498 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
NME3-204ENST00000563498 LDHDQ86WU2 507 aa24.84■■□□□ 1.57
NME3-204ENST00000563498 ALDH1B1P30837 517 aa24.83■■□□□ 1.57
NME3-204ENST00000563498 TAF1DQ9H5J8 278 aaPredicted RBP24.83■■□□□ 1.57
NME3-204ENST00000563498 PASKQ96RG2 1323 aa24.82■■□□□ 1.56
NME3-204ENST00000563498 HLFQ16534 295 aa24.81■■□□□ 1.56
NME3-204ENST00000563498 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
NME3-204ENST00000563498 ZNF277Q9NRM2 450 aaPredicted RBP24.81■■□□□ 1.56
NME3-204ENST00000563498 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
NME3-204ENST00000563498 FAM177BA6PVY3 158 aa24.79■■□□□ 1.56
NME3-204ENST00000563498 GTF2E1P29083 439 aaPredicted RBP24.79■■□□□ 1.56
NME3-204ENST00000563498 CRY2Q49AN0 593 aa24.79■■□□□ 1.56
NME3-204ENST00000563498 NYXQ9GZU5 481 aa24.79■■□□□ 1.56
NME3-204ENST00000563498 MKRN1Q9UHC7 482 aaKnown RBP24.79■■□□□ 1.56
NME3-204ENST00000563498 KDM3BQ7LBC6 1761 aa24.79■■□□□ 1.56
NME3-204ENST00000563498 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
NME3-204ENST00000563498 NEFMP07197 916 aa24.78■■□□□ 1.56
NME3-204ENST00000563498 OLFM4Q6UX06 510 aa24.78■■□□□ 1.56
NME3-204ENST00000563498 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
NME3-204ENST00000563498 CNTNAP1P78357 1384 aa24.78■■□□□ 1.56
NME3-204ENST00000563498 FZD9O00144 591 aa24.77■■□□□ 1.56
NME3-204ENST00000563498 IARSP41252 1262 aaKnown RBP24.77■■□□□ 1.56
NME3-204ENST00000563498 HACL1Q9UJ83 578 aa24.77■■□□□ 1.56
NME3-204ENST00000563498 SNED1Q8TER0 1413 aa24.77■■□□□ 1.56
NME3-204ENST00000563498 ADAMTSL1Q8N6G6 1762 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 CAPN15O75808 1086 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 ITGBL1O95965 494 aaPredicted RBP24.76■■□□□ 1.55
NME3-204ENST00000563498 CC2D2BQ6DHV5 1058 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 SYNE4Q8N205 404 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 PSMD1Q99460 953 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 IBTKQ9P2D0 1353 aaPredicted RBP24.76■■□□□ 1.55
NME3-204ENST00000563498 RIC1Q4ADV7 1423 aa24.76■■□□□ 1.55
NME3-204ENST00000563498 MAP3K15Q6ZN16 1313 aa24.75■■□□□ 1.55
NME3-204ENST00000563498 ABCC12Q96J65 1359 aa24.75■■□□□ 1.55
NME3-204ENST00000563498 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
NME3-204ENST00000563498 EPHX2P34913 555 aa24.74■■□□□ 1.55
NME3-204ENST00000563498 EIF4A1P60842 406 aaKnown RBP24.74■■□□□ 1.55
NME3-204ENST00000563498 PNMA8AQ86V59 439 aaPredicted RBP24.74■■□□□ 1.55
NME3-204ENST00000563498 GPC2Q8N158 579 aa24.74■■□□□ 1.55
NME3-204ENST00000563498 NUP98P52948 1817 aa24.74■■□□□ 1.55
NME3-204ENST00000563498 TMEM88BA6NKF7 163 aa24.73■■□□□ 1.55
NME3-204ENST00000563498 HOXA10P31260 410 aaPredicted RBP24.73■■□□□ 1.55
NME3-204ENST00000563498 GRIPAP1Q4V328 841 aa24.73■■□□□ 1.55
NME3-204ENST00000563498 EAPPQ56P03 285 aaPredicted RBP24.73■■□□□ 1.55
NME3-204ENST00000563498 KIF6Q6ZMV9 814 aa24.73■■□□□ 1.55
NME3-204ENST00000563498 PLEKHF1Q96S99 279 aa24.73■■□□□ 1.55
NME3-204ENST00000563498 NUTM1Q86Y26 1132 aa24.72■■□□□ 1.55
NME3-204ENST00000563498 NGEFQ8N5V2 710 aa24.72■■□□□ 1.55
NME3-204ENST00000563498 JDP2Q8WYK2 163 aa24.72■■□□□ 1.55
NME3-204ENST00000563498 RNF123Q5XPI4 1314 aa24.7■■□□□ 1.54
NME3-204ENST00000563498 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms