RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PRR5LQ6MZQ0 368 aa10.72□□□□□ -0.69
HERPUD1-206ENST00000563343 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
HERPUD1-206ENST00000563343 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.69
HERPUD1-206ENST00000563343 C7orf43Q8WVR3 580 aa10.71□□□□□ -0.69
HERPUD1-206ENST00000563343 ZNF541Q9H0D2 1346 aa10.71□□□□□ -0.69
HERPUD1-206ENST00000563343 SRGNP10124 158 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 EPHX2P34913 555 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 PDE6BP35913 854 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 EIF5P55010 431 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 SLC39A6Q13433 755 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 PRPF40BQ6NWY9 871 aaKnown RBP10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 BICDL1Q6ZP65 573 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 CNTROBQ8N137 903 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
HERPUD1-206ENST00000563343 COL4A5P29400 1685 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 EAPPQ56P03 285 aaPredicted RBP10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 MAP1SQ66K74 1059 aaPredicted RBP10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 STYK1Q6J9G0 422 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 HACL1Q9UJ83 578 aa10.69□□□□□ -0.7
HERPUD1-206ENST00000563343 FMR1Q06787 632 aaKnown RBP eCLIP10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 VSIG10Q8N0Z9 540 aa10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 MCOLN1Q9GZU1 580 aa10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 CLEC11AQ9Y240 323 aa10.68□□□□□ -0.7
HERPUD1-206ENST00000563343 RNF123Q5XPI4 1314 aa10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 DSG3P32926 999 aa10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 TNNT2P45379 298 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 CYP4F22Q6NT55 531 aa10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 CAPNS2Q96L46 248 aa10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 ABT1Q9ULW3 272 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-206ENST00000563343 FZD9O00144 591 aa10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 FKBP4Q02790 459 aaKnown RBP eCLIP10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 PNMA8AQ86V59 439 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 MASTLQ96GX5 879 aa10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
HERPUD1-206ENST00000563343 A0A087WZG4 1122 aa10.65□□□□□ -0.7
HERPUD1-206ENST00000563343 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
HERPUD1-206ENST00000563343 CST9Q5W186 159 aa10.65□□□□□ -0.7
HERPUD1-206ENST00000563343 GPR101Q96P66 508 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-206ENST00000563343 ZNF277Q9NRM2 450 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-206ENST00000563343 AOC2O75106 756 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 CAMTA2O94983 1202 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 IL13P35225 146 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 ECE1P42892 770 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 OLFM4Q6UX06 510 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
HERPUD1-206ENST00000563343 KLRG2A4D1S0 409 aaPredicted RBP10.63□□□□□ -0.71
HERPUD1-206ENST00000563343 MAP2K2P36507 400 aa10.63□□□□□ -0.71
HERPUD1-206ENST00000563343 GPC2Q8N158 579 aa10.63□□□□□ -0.71
HERPUD1-206ENST00000563343 HEG1Q9ULI3 1381 aa10.63□□□□□ -0.71
HERPUD1-206ENST00000563343 STARD3NLO95772 234 aa10.62□□□□□ -0.71
HERPUD1-206ENST00000563343 IL6STP40189 918 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-206ENST00000563343 IARSP41252 1262 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-206ENST00000563343 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
HERPUD1-206ENST00000563343 AKAP11Q9UKA4 1901 aa10.62□□□□□ -0.71
HERPUD1-206ENST00000563343 TRAF5O00463 557 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 SCNN1DP51172 638 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 ST5P78524 1137 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 DGKZQ13574 1117 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 NUP98P52948 1817 aa10.61□□□□□ -0.71
HERPUD1-206ENST00000563343 POLR2AP24928 1970 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 CA12O43570 354 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 ABCB7O75027 752 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 NPR1P16066 1061 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 EPS15P42566 896 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 GRM1Q13255 1194 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 SYNE4Q8N205 404 aa10.6□□□□□ -0.71
HERPUD1-206ENST00000563343 A1BGP04217 495 aa10.59□□□□□ -0.71
HERPUD1-206ENST00000563343 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
HERPUD1-206ENST00000563343 PAXIP1Q6ZW49 1069 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-206ENST00000563343 SAPCD2Q86UD0 394 aa10.59□□□□□ -0.71
HERPUD1-206ENST00000563343 PRPF38BQ5VTL8 546 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-206ENST00000563343 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
HERPUD1-206ENST00000563343 PSMD1Q99460 953 aa10.58□□□□□ -0.72
HERPUD1-206ENST00000563343 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
HERPUD1-206ENST00000563343 ZNF790Q6PG37 636 aa10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 GJA3Q9Y6H8 435 aa10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 LAMB4A4D0S4 1761 aa10.57□□□□□ -0.72
HERPUD1-206ENST00000563343 NPHP1O15259 732 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms