RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 CHL1O00533 1208 aa16.51■□□□□ 0.23
PKM-208ENST00000563275 PDE6BP35913 854 aa16.51■□□□□ 0.23
PKM-208ENST00000563275 HLFQ16534 295 aa16.51■□□□□ 0.23
PKM-208ENST00000563275 TTLL6Q8N841 843 aa16.51■□□□□ 0.23
PKM-208ENST00000563275 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
PKM-208ENST00000563275 PDIA6Q15084 440 aa16.5■□□□□ 0.23
PKM-208ENST00000563275 GPBP1L1Q9HC44 474 aaPredicted RBP16.5■□□□□ 0.23
PKM-208ENST00000563275 MAP3K15Q6ZN16 1313 aa16.49■□□□□ 0.23
PKM-208ENST00000563275 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
PKM-208ENST00000563275 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
PKM-208ENST00000563275 KIF3CO14782 793 aa16.48■□□□□ 0.23
PKM-208ENST00000563275 SRGNP10124 158 aa16.48■□□□□ 0.23
PKM-208ENST00000563275 PRELPP51888 382 aa16.48■□□□□ 0.23
PKM-208ENST00000563275 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
PKM-208ENST00000563275 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
PKM-208ENST00000563275 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
PKM-208ENST00000563275 ST5P78524 1137 aa16.47■□□□□ 0.23
PKM-208ENST00000563275 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
PKM-208ENST00000563275 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
PKM-208ENST00000563275 SBF1O95248 1867 aa16.46■□□□□ 0.23
PKM-208ENST00000563275 NFKBIEO00221 500 aa16.46■□□□□ 0.23
PKM-208ENST00000563275 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
PKM-208ENST00000563275 PROSER3Q2NL68 480 aa16.46■□□□□ 0.23
PKM-208ENST00000563275 ZNF526Q8TF50 670 aaPredicted RBP16.46■□□□□ 0.23
PKM-208ENST00000563275 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 MYL6BP14649 208 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 RASSF7Q02833 373 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
PKM-208ENST00000563275 ZC3H4Q9UPT8 1303 aaKnown RBP16.45■□□□□ 0.22
PKM-208ENST00000563275 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 CCDC184Q52MB2 194 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.224e-17■□□□□ 9.7
PKM-208ENST00000563275 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 RNF181Q9P0P0 153 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 NUP98P52948 1817 aa16.44■□□□□ 0.22
PKM-208ENST00000563275 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 ABCC12Q96J65 1359 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 APAF1O14727 1248 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 HOXB7P09629 217 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 LMNB1P20700 586 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
PKM-208ENST00000563275 GIGYF2Q6Y7W6 1299 aaKnown RBP16.43■□□□□ 0.22
PKM-208ENST00000563275 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 LTBP3Q9NS15 1303 aa16.43■□□□□ 0.22
PKM-208ENST00000563275 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
PKM-208ENST00000563275 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
PKM-208ENST00000563275 ZBTB3Q9H5J0 574 aa16.42■□□□□ 0.22
PKM-208ENST00000563275 TNRC6CQ9HCJ0 1690 aaKnown RBP16.42■□□□□ 0.22
PKM-208ENST00000563275 FER1L6Q2WGJ9 1857 aa16.42■□□□□ 0.22
PKM-208ENST00000563275 NPHP1O15259 732 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 C21orf2O43822 256 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 ANXA1P04083 346 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 NPR1P16066 1061 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
PKM-208ENST00000563275 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
PKM-208ENST00000563275 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
PKM-208ENST00000563275 SUSD4Q5VX71 490 aa16.4■□□□□ 0.22
PKM-208ENST00000563275 NYXQ9GZU5 481 aa16.4■□□□□ 0.22
PKM-208ENST00000563275 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
PKM-208ENST00000563275 NTSR2O95665 410 aa16.39■□□□□ 0.21
PKM-208ENST00000563275 IFT57Q9NWB7 429 aa16.39■□□□□ 0.21
PKM-208ENST00000563275 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 GPTP24298 496 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 PARP10Q53GL7 1025 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 NUTM1Q86Y26 1132 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
PKM-208ENST00000563275 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
PKM-208ENST00000563275 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
PKM-208ENST00000563275 TAOK3Q9H2K8 898 aa16.37■□□□□ 0.21
PKM-208ENST00000563275 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
PKM-208ENST00000563275 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
PKM-208ENST00000563275 KDM2BQ8NHM5 1336 aa16.37■□□□□ 0.21
PKM-208ENST00000563275 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 TOMM70O94826 608 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
PKM-208ENST00000563275 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
PKM-208ENST00000563275 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
PKM-208ENST00000563275 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
PKM-208ENST00000563275 GNAI1P63096 354 aa16.35■□□□□ 0.21
PKM-208ENST00000563275 TCIRG1Q13488 830 aa16.35■□□□□ 0.21
PKM-208ENST00000563275 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms