RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
CDH11-204ENST00000562712 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
CDH11-204ENST00000562712 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
CDH11-204ENST00000562712 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
CDH11-204ENST00000562712 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 GYS1P13807 737 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 RARSP54136 660 aaKnown RBP16.32■□□□□ 0.2
CDH11-204ENST00000562712 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
CDH11-204ENST00000562712 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
CDH11-204ENST00000562712 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
CDH11-204ENST00000562712 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
CDH11-204ENST00000562712 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
CDH11-204ENST00000562712 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
CDH11-204ENST00000562712 DDX58O95786 925 aaKnown RBP16.3■□□□□ 0.2
CDH11-204ENST00000562712 FLIIQ13045 1269 aa16.3■□□□□ 0.2
CDH11-204ENST00000562712 G2E3Q7L622 706 aa16.3■□□□□ 0.2
CDH11-204ENST00000562712 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
CDH11-204ENST00000562712 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
CDH11-204ENST00000562712 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
CDH11-204ENST00000562712 POLD1P28340 1107 aa16.29■□□□□ 0.2
CDH11-204ENST00000562712 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
CDH11-204ENST00000562712 CHD4Q14839 1912 aa16.29■□□□□ 0.2
CDH11-204ENST00000562712 UTRNP46939 3433 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 FKBP8Q14318 412 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 HLFQ16534 295 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 KSR2Q6VAB6 950 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
CDH11-204ENST00000562712 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
CDH11-204ENST00000562712 TM4SF1P30408 202 aa16.27■□□□□ 0.2
CDH11-204ENST00000562712 FKBP5Q13451 457 aaPredicted RBP16.27■□□□□ 0.2
CDH11-204ENST00000562712 RIC3Q7Z5B4 369 aa16.27■□□□□ 0.2
CDH11-204ENST00000562712 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
CDH11-204ENST00000562712 PTPRCP08575 1304 aa16.26■□□□□ 0.19
CDH11-204ENST00000562712 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
CDH11-204ENST00000562712 BCAR3O75815 825 aa16.26■□□□□ 0.19
CDH11-204ENST00000562712 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
CDH11-204ENST00000562712 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
CDH11-204ENST00000562712 TCIRG1Q13488 830 aa16.25■□□□□ 0.19
CDH11-204ENST00000562712 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
CDH11-204ENST00000562712 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
CDH11-204ENST00000562712 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
CDH11-204ENST00000562712 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
CDH11-204ENST00000562712 NOB1Q9ULX3 412 aaKnown RBP16.25■□□□□ 0.19
CDH11-204ENST00000562712 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 IPO8O15397 1037 aaKnown RBP16.24■□□□□ 0.19
CDH11-204ENST00000562712 NFIXQ14938 502 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
CDH11-204ENST00000562712 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 ADCY9O60503 1353 aa16.24■□□□□ 0.19
CDH11-204ENST00000562712 KIF16BQ96L93 1317 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 ATP10DQ9P241 1426 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 TRIM28Q13263 835 aaKnown RBP16.23■□□□□ 0.19
CDH11-204ENST00000562712 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDH11-204ENST00000562712 NUP98P52948 1817 aa16.23■□□□□ 0.19
CDH11-204ENST00000562712 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
CDH11-204ENST00000562712 MMP10P09238 476 aa16.22■□□□□ 0.19
CDH11-204ENST00000562712 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
CDH11-204ENST00000562712 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
CDH11-204ENST00000562712 GOLGB1Q14789 3259 aaKnown RBP16.22■□□□□ 0.19
CDH11-204ENST00000562712 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
CDH11-204ENST00000562712 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
CDH11-204ENST00000562712 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
CDH11-204ENST00000562712 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.19
CDH11-204ENST00000562712 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
CDH11-204ENST00000562712 F6X3S4 739 aa16.2■□□□□ 0.18
CDH11-204ENST00000562712 DDR1Q08345 913 aa16.2■□□□□ 0.18
CDH11-204ENST00000562712 MYD88Q99836 296 aa16.2■□□□□ 0.18
CDH11-204ENST00000562712 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
CDH11-204ENST00000562712 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
CDH11-204ENST00000562712 ARFGEF2Q9Y6D5 1785 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 SERPINB2P05120 415 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 GPTP24298 496 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 NLRP10Q86W26 655 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
CDH11-204ENST00000562712 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
CDH11-204ENST00000562712 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 YY1P25490 414 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 NYXQ9GZU5 481 aa16.18■□□□□ 0.18
CDH11-204ENST00000562712 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms