RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 CHMP3Q9Y3E7 222 aa9.1□□□□□ -0.95
SMG1-206ENST00000562668 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
SMG1-206ENST00000562668 POTEAQ6S8J7 498 aa9.09□□□□□ -0.95
SMG1-206ENST00000562668 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
SMG1-206ENST00000562668 CALR3Q96L12 384 aaKnown RBP9.09□□□□□ -0.95
SMG1-206ENST00000562668 IGHA1P01876 353 aa9.08□□□□□ -0.96
SMG1-206ENST00000562668 RASA1P20936 1047 aa9.08□□□□□ -0.96
SMG1-206ENST00000562668 ZNF468Q5VIY5 522 aaPredicted RBP9.08□□□□□ -0.96
SMG1-206ENST00000562668 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
SMG1-206ENST00000562668 STRN4Q9NRL3 753 aa9.08□□□□□ -0.96
SMG1-206ENST00000562668 MARK1Q9P0L2 795 aa9.08□□□□□ -0.96
SMG1-206ENST00000562668 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
SMG1-206ENST00000562668 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
SMG1-206ENST00000562668 C1orf53Q5VUE5 145 aa9.07□□□□□ -0.96
SMG1-206ENST00000562668 C7orf43Q8WVR3 580 aa9.07□□□□□ -0.96
SMG1-206ENST00000562668 PPP1R12CQ9BZL4 782 aa9.07□□□□□ -0.96
SMG1-206ENST00000562668 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
SMG1-206ENST00000562668 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
SMG1-206ENST00000562668 PHACTR1Q9C0D0 580 aa9.06□□□□□ -0.96
SMG1-206ENST00000562668 NEUROD4Q9HD90 331 aa9.06□□□□□ -0.96
SMG1-206ENST00000562668 KLF15Q9UIH9 416 aa9.06□□□□□ -0.96
SMG1-206ENST00000562668 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
SMG1-206ENST00000562668 DGKGP49619 791 aa9.05□□□□□ -0.96
SMG1-206ENST00000562668 SEC13P55735 322 aa9.05□□□□□ -0.96
SMG1-206ENST00000562668 PLA2G4EQ3MJ16 856 aa9.05□□□□□ -0.96
SMG1-206ENST00000562668 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
SMG1-206ENST00000562668 BTBD6Q96KE9 485 aa9.05□□□□□ -0.96
SMG1-206ENST00000562668 C21orf2O43822 256 aa9.04□□□□□ -0.96
SMG1-206ENST00000562668 PCBP4P57723 403 aaKnown RBP9.04□□□□□ -0.96
SMG1-206ENST00000562668 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
SMG1-206ENST00000562668 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
SMG1-206ENST00000562668 HSH2DQ96JZ2 352 aa9.04□□□□□ -0.96
SMG1-206ENST00000562668 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L21D6R901 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 PIK3R2O00459 728 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 GNB5O14775 395 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 USP17L24Q0WX57 530 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
SMG1-206ENST00000562668 STAG2Q8N3U4 1231 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 HCN4Q9Y3Q4 1203 aa9.03□□□□□ -0.96
SMG1-206ENST00000562668 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 ITGB2P05107 769 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 COL8A1P27658 744 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 PTK7Q13308 1070 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 KANK4Q5T7N3 995 aaPredicted RBP9.02□□□□□ -0.97
SMG1-206ENST00000562668 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.97
SMG1-206ENST00000562668 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
SMG1-206ENST00000562668 ATAD2Q6PL18 1390 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 DCAF1Q9Y4B6 1507 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 NACADO15069 1562 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 DPYDQ12882 1025 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 SYT9Q86SS6 491 aa9.01□□□□□ -0.97
SMG1-206ENST00000562668 C2orf49Q9BVC5 232 aaPredicted RBP9.01□□□□□ -0.97
SMG1-206ENST00000562668 MSTNO14793 375 aa9□□□□□ -0.97
SMG1-206ENST00000562668 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
SMG1-206ENST00000562668 TYRO3Q06418 890 aa9□□□□□ -0.97
SMG1-206ENST00000562668 SFSWAPQ12872 951 aaKnown RBP9□□□□□ -0.97
SMG1-206ENST00000562668 GRIN2CQ14957 1233 aa9□□□□□ -0.97
SMG1-206ENST00000562668 ALDH16A1Q8IZ83 802 aa9□□□□□ -0.97
SMG1-206ENST00000562668 SUSD3Q96L08 255 aa9□□□□□ -0.97
SMG1-206ENST00000562668 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
SMG1-206ENST00000562668 SUV39H2Q9H5I1 410 aa9□□□□□ -0.97
SMG1-206ENST00000562668 BRD7Q9NPI1 651 aa9□□□□□ -0.97
SMG1-206ENST00000562668 ANKMY2Q8IV38 441 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 ZNF280CQ8ND82 737 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 CEP63Q96MT8 703 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 MDFIQ99750 246 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
SMG1-206ENST00000562668 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
SMG1-206ENST00000562668 KRBA1A5PL33 1030 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 ELOA3DA6NLF2 546 aaPredicted RBP8.98□□□□□ -0.97
SMG1-206ENST00000562668 SIN3BO75182 1162 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 PROCP04070 461 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
SMG1-206ENST00000562668 HIF1AQ16665 826 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 ELOA3BQ3SY89 546 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 ELOA3Q8NG57 546 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
SMG1-206ENST00000562668 SLC30A3Q99726 388 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 HINFPQ9BQA5 517 aa8.98□□□□□ -0.97
SMG1-206ENST00000562668 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
SMG1-206ENST00000562668 IGFBP4P22692 258 aa8.97□□□□□ -0.97
SMG1-206ENST00000562668 KCNQ4P56696 695 aa8.97□□□□□ -0.97
SMG1-206ENST00000562668 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
SMG1-206ENST00000562668 NGLY1Q96IV0 654 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms