RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 STRN4Q9NRL3 753 aa7.53□□□□□ -1.2
DENND4A-205ENST00000562540 MARK1Q9P0L2 795 aa7.53□□□□□ -1.2
DENND4A-205ENST00000562540 PCDHGA11Q9Y5H2 935 aa7.53□□□□□ -1.2
DENND4A-205ENST00000562540 PARP3Q9Y6F1 533 aa7.53□□□□□ -1.2
DENND4A-205ENST00000562540 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
DENND4A-205ENST00000562540 PSME1Q06323 249 aa7.52□□□□□ -1.21
DENND4A-205ENST00000562540 GRIK4Q16099 956 aa7.52□□□□□ -1.21
DENND4A-205ENST00000562540 NOD1Q9Y239 953 aa7.52□□□□□ -1.21
DENND4A-205ENST00000562540 EFSO43281 561 aa7.51□□□□□ -1.21
DENND4A-205ENST00000562540 TXLNAP40222 546 aa7.51□□□□□ -1.21
DENND4A-205ENST00000562540 GTF2IP78347 998 aa7.51□□□□□ -1.21
DENND4A-205ENST00000562540 LAMC2Q13753 1193 aa7.51□□□□□ -1.21
DENND4A-205ENST00000562540 M0R082 166 aa7.5□□□□□ -1.21
DENND4A-205ENST00000562540 SKIP12755 728 aa7.5□□□□□ -1.21
DENND4A-205ENST00000562540 MCM6Q14566 821 aa7.5□□□□□ -1.21
DENND4A-205ENST00000562540 C8orf86Q6ZUL3 223 aa7.5□□□□□ -1.21
DENND4A-205ENST00000562540 ZNF417Q8TAU3 575 aa7.5□□□□□ -1.21
DENND4A-205ENST00000562540 ZNF587Q96SQ5 575 aaPredicted RBP7.5□□□□□ -1.21
DENND4A-205ENST00000562540 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 H2AFB2P0C5Z0 115 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 ALAS2P22557 587 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 TPRNQ4KMQ1 711 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
DENND4A-205ENST00000562540 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 NACC1Q96RE7 527 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
DENND4A-205ENST00000562540 STARD13Q9Y3M8 1113 aa7.49□□□□□ -1.21
DENND4A-205ENST00000562540 TRIM28Q13263 835 aaKnown RBP7.48□□□□□ -1.21
DENND4A-205ENST00000562540 LRRC69Q6ZNQ3 347 aa7.48□□□□□ -1.21
DENND4A-205ENST00000562540 L3MBTL2Q969R5 705 aa7.48□□□□□ -1.21
DENND4A-205ENST00000562540 NEUROD4Q9HD90 331 aa7.48□□□□□ -1.21
DENND4A-205ENST00000562540 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
DENND4A-205ENST00000562540 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
DENND4A-205ENST00000562540 TEAD4Q15561 434 aa7.47□□□□□ -1.21
DENND4A-205ENST00000562540 SIN3BO75182 1162 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 ALBP02768 609 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 NID1P14543 1247 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 NOS2P35228 1153 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 NCOA4Q13772 614 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 ADGRE1Q14246 886 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 TBCELQ5QJ74 424 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 MCTP1Q6DN14 999 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 NFATC2IPQ8NCF5 419 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 PRDM6Q9NQX0 595 aa7.46□□□□□ -1.22
DENND4A-205ENST00000562540 GPC6Q9Y625 555 aaPredicted RBP7.46□□□□□ -1.22
DENND4A-205ENST00000562540 ADARB2-AS1A8MUL3 147 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 EML1O00423 815 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 WWC1Q8IX03 1113 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 ALG2Q9H553 416 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
DENND4A-205ENST00000562540 SERTM1A2A2V5 107 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 USP17L5A8MUK1 530 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 SELPP16109 830 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 EPHA4P54764 986 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 TNS4Q8IZW8 715 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 DEPDC4Q8N2C3 294 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
DENND4A-205ENST00000562540 SFSWAPQ12872 951 aaKnown RBP7.43□□□□□ -1.22
DENND4A-205ENST00000562540 NEUROD1Q13562 356 aa7.43□□□□□ -1.22
DENND4A-205ENST00000562540 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
DENND4A-205ENST00000562540 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
DENND4A-205ENST00000562540 C9orf172C9J069 976 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 SPEM2Q0P670 501 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 TXNRD3Q86VQ6 643 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 TRIM50Q86XT4 487 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 TNFRSF25Q93038 417 aa7.42□□□□□ -1.22
DENND4A-205ENST00000562540 ADH7P40394 386 aa7.41□□□□□ -1.22
DENND4A-205ENST00000562540 RAB44Q7Z6P3 723 aaPredicted RBP7.41□□□□□ -1.22
DENND4A-205ENST00000562540 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
DENND4A-205ENST00000562540 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
DENND4A-205ENST00000562540 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
DENND4A-205ENST00000562540 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
DENND4A-205ENST00000562540 LCE1DQ5T752 114 aa7.4□□□□□ -1.22
DENND4A-205ENST00000562540 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
DENND4A-205ENST00000562540 C20orf204Q6ZNR8 217 aa7.4□□□□□ -1.22
DENND4A-205ENST00000562540 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
DENND4A-205ENST00000562540 BRD7Q9NPI1 651 aa7.4□□□□□ -1.22
DENND4A-205ENST00000562540 ATP1A2P50993 1020 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 C7orf43Q8WVR3 580 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 HSH2DQ96JZ2 352 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
DENND4A-205ENST00000562540 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
DENND4A-205ENST00000562540 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 KIAA1024Q9UPX6 916 aa7.39□□□□□ -1.23
DENND4A-205ENST00000562540 A0A0A0MRY4 1105 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 ELNP15502 786 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 C1orf53Q5VUE5 145 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 LENG1Q96BZ8 264 aaPredicted RBP7.38□□□□□ -1.23
DENND4A-205ENST00000562540 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
DENND4A-205ENST00000562540 USP17L3A6NCW0 530 aa7.37□□□□□ -1.23
DENND4A-205ENST00000562540 USP17L4A6NCW7 530 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms