RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC009090.1-201ENST00000562409 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
AC009090.1-201ENST00000562409 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 LILRB3O75022 631 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 GCP02774 474 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 TRIM26Q12899 539 aaPredicted RBP11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 CARD11Q9BXL7 1154 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
AC009090.1-201ENST00000562409 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 ABCA3Q99758 1704 aa11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 S1PR4O95977 384 aa11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
AC009090.1-201ENST00000562409 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
AC009090.1-201ENST00000562409 GGCXP38435 758 aa11.28□□□□□ -0.6
AC009090.1-201ENST00000562409 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
AC009090.1-201ENST00000562409 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
AC009090.1-201ENST00000562409 SPATA31A1Q5TZJ5 1347 aa11.28□□□□□ -0.6
AC009090.1-201ENST00000562409 BAG6P46379 1132 aa11.27□□□□□ -0.61
AC009090.1-201ENST00000562409 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
AC009090.1-201ENST00000562409 USP19O94966 1318 aa11.27□□□□□ -0.61
AC009090.1-201ENST00000562409 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 USP6P35125 1406 aa11.26□□□□□ -0.61
AC009090.1-201ENST00000562409 TRPM1Q7Z4N2 1603 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 CFAP99D6REC4 459 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 FAM196AQ6ZSG2 479 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 CPDO75976 1380 aa11.25□□□□□ -0.61
AC009090.1-201ENST00000562409 NRAPQ86VF7 1730 aa11.24□□□□□ -0.61
AC009090.1-201ENST00000562409 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
AC009090.1-201ENST00000562409 PPP2R2DQ66LE6 453 aa11.24□□□□□ -0.61
AC009090.1-201ENST00000562409 KCNH5Q8NCM2 988 aa11.24□□□□□ -0.61
AC009090.1-201ENST00000562409 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
AC009090.1-201ENST00000562409 JUNDP17535 347 aa11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
AC009090.1-201ENST00000562409 RFC5P40937 340 aa11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 TOM1L2Q6ZVM7 507 aa11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 TTC21AQ8NDW8 1320 aa11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 PRKD2Q9BZL6 878 aa11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
AC009090.1-201ENST00000562409 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 AATKQ6ZMQ8 1374 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 DXOO77932 396 aaKnown RBP11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 TRIM37O94972 964 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 MMP16P51512 607 aa11.21□□□□□ -0.61
AC009090.1-201ENST00000562409 AP1G2O75843 785 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 APBA3O96018 575 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 ARHGEF25Q86VW2 580 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 SLC12A5Q9H2X9 1139 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
AC009090.1-201ENST00000562409 SBNO2Q9Y2G9 1366 aa11.19□□□□□ -0.62
AC009090.1-201ENST00000562409 DESI1Q6ICB0 168 aa11.19□□□□□ -0.62
AC009090.1-201ENST00000562409 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
AC009090.1-201ENST00000562409 CRB1P82279 1406 aa11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 C11orf95C9JLR9 678 aaPredicted RBP11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 NRG2O14511 850 aaPredicted RBP11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 EZH2Q15910 746 aaKnown RBP11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 COL5A2P05997 1499 aaPredicted RBP11.18□□□□□ -0.62
AC009090.1-201ENST00000562409 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 DDB1Q16531 1140 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 NME9Q86XW9 330 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 NUDT12Q9BQG2 462 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
AC009090.1-201ENST00000562409 SLIT3O75094 1523 aa11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 PTPRNQ16849 979 aa11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 ZNF775Q96BV0 537 aaPredicted RBP11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 CARD10Q9BWT7 1032 aa11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
AC009090.1-201ENST00000562409 LMO7Q8WWI1 1683 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms