RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 NBPF4Q96M43 638 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 TSEN34Q9BSV6 310 aaKnown RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 DNMT3LQ9UJW3 386 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 SOS2Q07890 1332 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-211ENST00000562199 RAB3GAP2Q9H2M9 1393 aa6.93□□□□□ -1.3
CAPN3-211ENST00000562199 PPFIA3O75145 1194 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 WDHD1O75717 1129 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 STK10O94804 968 aaKnown RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 RAB15P59190 212 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 KANK4Q5T7N3 995 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 DNAJC14Q6Y2X3 702 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 TXNDC2Q86VQ3 553 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 SNRNP27Q8WVK2 155 aaKnown RBP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.92□□□□□ -1.3
CAPN3-211ENST00000562199 FAN1Q9Y2M0 1017 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 SBNO2Q9Y2G9 1366 aa6.92□□□□□ -1.3
CAPN3-211ENST00000562199 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
CAPN3-211ENST00000562199 PTK2Q05397 1052 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 PSME1Q06323 249 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 MCM6Q14566 821 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 DPH6Q7L8W6 267 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 AGBL1Q96MI9 1066 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 OCSTAMPQ9BR26 566 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-211ENST00000562199 BSDC1Q9NW68 430 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-211ENST00000562199 SETD5Q9C0A6 1442 aa6.91□□□□□ -1.3
CAPN3-211ENST00000562199 WDR97A6NE52 1622 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 TTLL8A6PVC2 850 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 SF3A1Q15459 793 aaKnown RBP6.9□□□□□ -1.3
CAPN3-211ENST00000562199 C11orf96Q7Z7L8 435 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.9□□□□□ -1.3
CAPN3-211ENST00000562199 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 ATL2Q8NHH9 583 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 ADAM32Q8TC27 787 aa6.9□□□□□ -1.3
CAPN3-211ENST00000562199 FBXO9Q9UK97 447 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-211ENST00000562199 LRRC9Q6ZRR7 1453 aa6.9□□□□□ -1.31
CAPN3-211ENST00000562199 CFAP69A5D8W1 941 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 USP17L8P0C7I0 530 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 SSR1P43307 286 aaKnown RBP6.89□□□□□ -1.31
CAPN3-211ENST00000562199 IGBP1P78318 339 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 HSP90AB2PQ58FF8 381 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
CAPN3-211ENST00000562199 POM121Q96HA1 1249 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 IRF2BPLQ9H1B7 796 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
CAPN3-211ENST00000562199 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
CAPN3-211ENST00000562199 PCF11O94913 1555 aaKnown RBP6.89□□□□□ -1.31
CAPN3-211ENST00000562199 RFC5P40937 340 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 RELBQ01201 579 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.31
CAPN3-211ENST00000562199 NAALADL2Q58DX5 795 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 Q6ZVU0 165 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
CAPN3-211ENST00000562199 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-211ENST00000562199 RAI14Q9P0K7 980 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 GABBR1Q9UBS5 961 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 NRBP1Q9UHY1 535 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 CDV3Q9UKY7 258 aaKnown RBP6.88□□□□□ -1.31
CAPN3-211ENST00000562199 WWC3Q9ULE0 1092 aa6.88□□□□□ -1.31
CAPN3-211ENST00000562199 CFTRP13569 1480 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 NCAPD3P42695 1498 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.87□□□□□ -1.31
CAPN3-211ENST00000562199 hCG_2014768A0A024R1R8 64 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 VSIG8P0DPA2 414 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 PTSQ03393 145 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 DHX9Q08211 1270 aaKnown RBP6.87□□□□□ -1.31
CAPN3-211ENST00000562199 ZKSCAN8Q15776 578 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-211ENST00000562199 DZIP3Q86Y13 1208 aaKnown RBP6.87□□□□□ -1.31
CAPN3-211ENST00000562199 ZNF513Q8N8E2 541 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-211ENST00000562199 SWAP70Q9UH65 585 aa6.87□□□□□ -1.31
CAPN3-211ENST00000562199 FHAD1B1AJZ9 1412 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 SPINT1O43278 529 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 FAM200BP0CF97 657 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 RGS3P49796 1198 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 MAP2K1Q02750 393 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 ZRSR2Q15696 482 aaKnown RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 PTPROQ16827 1216 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 TAF3Q5VWG9 929 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 NOP9Q86U38 636 aaKnown RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 GPR161Q8N6U8 529 aaKnown RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 INSM2Q96T92 566 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-211ENST00000562199 YY1AP1Q9H869 796 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 SYNPO2Q9UMS6 1093 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 EFCAB5A4FU69 1503 aa6.86□□□□□ -1.31
CAPN3-211ENST00000562199 FYCO1Q9BQS8 1478 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 ZNF16P17020 682 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-211ENST00000562199 ICE2Q659A1 982 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 PNMA1Q8ND90 353 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 KCNB2Q92953 911 aa6.85□□□□□ -1.31
CAPN3-211ENST00000562199 PCMTD1Q96MG8 357 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-211ENST00000562199 TMX4Q9H1E5 349 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms