RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 AMIGO3Q86WK7 504 aa29.64■■■□□ 2.34
TMEM249-201ENST00000561638 FTSJ3Q8IY81 847 aaKnown RBP29.64■■■□□ 2.34
TMEM249-201ENST00000561638 ZBTB3Q9H5J0 574 aa29.64■■■□□ 2.34
TMEM249-201ENST00000561638 PI4KAP2A4QPH2 592 aa29.64■■■□□ 2.34
TMEM249-201ENST00000561638 TRIM27P14373 513 aa29.64■■■□□ 2.34
TMEM249-201ENST00000561638 PI4KAP1Q8N8J0 262 aa29.64■■■□□ 2.34
TMEM249-201ENST00000561638 RFC4P35249 363 aa29.63■■■□□ 2.33
TMEM249-201ENST00000561638 SLC15A2Q16348 729 aa29.63■■■□□ 2.33
TMEM249-201ENST00000561638 KSR2Q6VAB6 950 aa29.63■■■□□ 2.33
TMEM249-201ENST00000561638 CLUAP1Q96AJ1 413 aa29.63■■■□□ 2.33
TMEM249-201ENST00000561638 UBR3Q6ZT12 1888 aa29.62■■■□□ 2.33
TMEM249-201ENST00000561638 F6X3S4 739 aa29.62■■■□□ 2.33
TMEM249-201ENST00000561638 PLBD2Q8NHP8 589 aa29.62■■■□□ 2.33
TMEM249-201ENST00000561638 MAP3K2Q9Y2U5 619 aa29.62■■■□□ 2.33
TMEM249-201ENST00000561638 ARHGEF1Q92888 912 aaKnown RBP29.62■■■□□ 2.33
TMEM249-201ENST00000561638 MAP3K15Q6ZN16 1313 aa29.61■■■□□ 2.33
TMEM249-201ENST00000561638 ZPR1O75312 459 aa29.61■■■□□ 2.33
TMEM249-201ENST00000561638 SLC4A10Q6U841 1118 aa29.61■■■□□ 2.33
TMEM249-201ENST00000561638 MSH5O43196 834 aa29.6■■■□□ 2.33
TMEM249-201ENST00000561638 MS4A1P11836 297 aa29.59■■■□□ 2.33
TMEM249-201ENST00000561638 FLAD1Q8NFF5 587 aa29.59■■■□□ 2.33
TMEM249-201ENST00000561638 DNAAF4Q8WXU2 420 aa29.59■■■□□ 2.33
TMEM249-201ENST00000561638 ADCY9O60503 1353 aa29.59■■■□□ 2.33
TMEM249-201ENST00000561638 DZIP1LQ8IYY4 767 aaKnown RBP29.58■■■□□ 2.33
TMEM249-201ENST00000561638 TNNQ9UQP3 1299 aa29.58■■■□□ 2.33
TMEM249-201ENST00000561638 NARFQ9UHQ1 456 aa29.57■■■□□ 2.32
TMEM249-201ENST00000561638 RNF123Q5XPI4 1314 aa29.57■■■□□ 2.32
TMEM249-201ENST00000561638 ERVV-1B6SEH8 477 aa29.57■■■□□ 2.32
TMEM249-201ENST00000561638 NEXNQ0ZGT2 675 aa29.57■■■□□ 2.32
TMEM249-201ENST00000561638 ZNF652Q9Y2D9 606 aa29.57■■■□□ 2.32
TMEM249-201ENST00000561638 CAMTA2O94983 1202 aa29.56■■■□□ 2.32
TMEM249-201ENST00000561638 SRP68Q9UHB9 627 aaKnown RBP29.56■■■□□ 2.32
TMEM249-201ENST00000561638 PNPLA7Q6ZV29 1317 aa29.55■■■□□ 2.32
TMEM249-201ENST00000561638 USP42Q9H9J4 1324 aaKnown RBP29.55■■■□□ 2.32
TMEM249-201ENST00000561638 USPL1Q5W0Q7 1092 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 PANK1Q8TE04 598 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 C4AP0C0L4 1744 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 TUBGCP6Q96RT7 1819 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 HLFQ16534 295 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 COL23A1Q86Y22 540 aaPredicted RBP29.54■■■□□ 2.32
TMEM249-201ENST00000561638 MYD88Q99836 296 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 METTL22Q9BUU2 404 aaPredicted RBP29.54■■■□□ 2.32
TMEM249-201ENST00000561638 ABCC4O15439 1325 aa29.54■■■□□ 2.32
TMEM249-201ENST00000561638 ARFGEF2Q9Y6D5 1785 aa29.53■■■□□ 2.32
TMEM249-201ENST00000561638 PDE3AQ14432 1141 aa29.53■■■□□ 2.32
TMEM249-201ENST00000561638 C20orf194Q5TEA3 1177 aa29.53■■■□□ 2.32
TMEM249-201ENST00000561638 GIGYF2Q6Y7W6 1299 aaKnown RBP29.53■■■□□ 2.32
TMEM249-201ENST00000561638 HSP90AB3PQ58FF7 597 aa29.52■■■□□ 2.32
TMEM249-201ENST00000561638 RLBP1P12271 317 aa29.52■■■□□ 2.32
TMEM249-201ENST00000561638 CCT4P50991 539 aaKnown RBP29.5■■■□□ 2.31
TMEM249-201ENST00000561638 ITPRIPQ8IWB1 547 aa29.5■■■□□ 2.31
TMEM249-201ENST00000561638 PXDNLA1KZ92 1463 aa29.5■■■□□ 2.31
TMEM249-201ENST00000561638 SCN7AQ01118 1682 aa29.5■■■□□ 2.31
TMEM249-201ENST00000561638 ATP5J2-PTCD1G3V325 749 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 CLEC4GQ6UXB4 293 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 TMEM57Q8N5G2 664 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 SRCIN1Q9C0H9 1055 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 BCORQ6W2J9 1755 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 TCIRG1Q13488 830 aa29.49■■■□□ 2.31
TMEM249-201ENST00000561638 IRX6P78412 446 aaPredicted RBP29.48■■■□□ 2.31
TMEM249-201ENST00000561638 BEND3Q5T5X7 828 aa29.48■■■□□ 2.31
TMEM249-201ENST00000561638 LINS1Q8NG48 757 aa29.48■■■□□ 2.31
TMEM249-201ENST00000561638 NEFLP07196 543 aa29.47■■■□□ 2.31
TMEM249-201ENST00000561638 GPTP24298 496 aa29.47■■■□□ 2.31
TMEM249-201ENST00000561638 COG6Q9Y2V7 657 aa29.47■■■□□ 2.31
TMEM249-201ENST00000561638 RGL2O15211 777 aa29.47■■■□□ 2.31
TMEM249-201ENST00000561638 R3HDM1Q15032 1099 aaKnown RBP29.47■■■□□ 2.31
TMEM249-201ENST00000561638 CWF19L2Q2TBE0 894 aaKnown RBP29.47■■■□□ 2.31
TMEM249-201ENST00000561638 ATP10DQ9P241 1426 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 GYS1P13807 737 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 INTS3Q68E01 1043 aaKnown RBP29.46■■■□□ 2.31
TMEM249-201ENST00000561638 BICDL1Q6ZP65 573 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 BCL2L12Q9HB09 334 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 NIP7Q9Y221 180 aaKnown RBP eCLIP29.46■■■□□ 2.31
TMEM249-201ENST00000561638 NUP98P52948 1817 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 QSER1Q2KHR3 1735 aa29.46■■■□□ 2.31
TMEM249-201ENST00000561638 IGKV5-2P06315 115 aa29.44■■■□□ 2.3
TMEM249-201ENST00000561638 FKBP8Q14318 412 aa29.44■■■□□ 2.3
TMEM249-201ENST00000561638 NEURL1BA8MQ27 555 aa29.43■■■□□ 2.3
TMEM249-201ENST00000561638 ALDH1L1O75891 902 aa29.43■■■□□ 2.3
TMEM249-201ENST00000561638 MVPQ14764 893 aaKnown RBP29.43■■■□□ 2.3
TMEM249-201ENST00000561638 TBC1D9BQ66K14 1250 aa29.42■■■□□ 2.3
TMEM249-201ENST00000561638 SOCS7O14512 581 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 ZNF34Q8IZ26 560 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 SETDB2Q96T68 719 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 ISCA1Q9BUE6 129 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 CWC25Q9NXE8 425 aaPredicted RBP29.41■■■□□ 2.3
TMEM249-201ENST00000561638 NLGN1Q8N2Q7 840 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 CCDC191Q8NCU4 936 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 PDGFDQ9GZP0 370 aaPredicted RBP29.41■■■□□ 2.3
TMEM249-201ENST00000561638 ANKRD36CQ5JPF3 1778 aa29.41■■■□□ 2.3
TMEM249-201ENST00000561638 PSDA5PKW4 1024 aaPredicted RBP29.4■■■□□ 2.3
TMEM249-201ENST00000561638 MSL1Q68DK7 614 aa29.4■■■□□ 2.3
TMEM249-201ENST00000561638 C9orf78Q9NZ63 289 aaPredicted RBP29.4■■■□□ 2.3
TMEM249-201ENST00000561638 DDX19BQ9UMR2 479 aa29.4■■■□□ 2.3
TMEM249-201ENST00000561638 TRIM28Q13263 835 aaKnown RBP29.39■■■□□ 2.3
TMEM249-201ENST00000561638 PARP10Q53GL7 1025 aa29.39■■■□□ 2.3
TMEM249-201ENST00000561638 NLRP10Q86W26 655 aa29.39■■■□□ 2.3
TMEM249-201ENST00000561638 CRBNQ96SW2 442 aa29.39■■■□□ 2.3
TMEM249-201ENST00000561638 UBN2Q6ZU65 1347 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms