RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 IL6STP40189 918 aaPredicted RBP33.5■■■□□ 2.95
NME3-202ENST00000561637 TAF7Q15545 349 aaPredicted RBP33.5■■■□□ 2.95
NME3-202ENST00000561637 CACNA1SQ13698 1873 aa33.49■■■□□ 2.95
NME3-202ENST00000561637 TBC1D9BQ66K14 1250 aa33.49■■■□□ 2.95
NME3-202ENST00000561637 ZNF219Q9P2Y4 722 aaPredicted RBP33.49■■■□□ 2.95
NME3-202ENST00000561637 A0A087WZG4 1122 aa33.48■■■□□ 2.95
NME3-202ENST00000561637 MYBBP1AQ9BQG0 1328 aaKnown RBP33.48■■■□□ 2.95
NME3-202ENST00000561637 NEFMP07197 916 aa33.47■■■□□ 2.95
NME3-202ENST00000561637 SNRPA1P09661 255 aaKnown RBP33.47■■■□□ 2.95
NME3-202ENST00000561637 CCDC24Q8N4L8 307 aa33.47■■■□□ 2.95
NME3-202ENST00000561637 C21orf2O43822 256 aa33.46■■■□□ 2.95
NME3-202ENST00000561637 CAMTA2O94983 1202 aa33.46■■■□□ 2.95
NME3-202ENST00000561637 DPY19L2Q6NUT2 758 aa33.46■■■□□ 2.95
NME3-202ENST00000561637 ZNF622Q969S3 477 aaKnown RBP eCLIP33.46■■■□□ 2.95
NME3-202ENST00000561637 MAPK8IP3Q9UPT6 1336 aa33.46■■■□□ 2.95
NME3-202ENST00000561637 KDM3BQ7LBC6 1761 aa33.45■■■□□ 2.95
NME3-202ENST00000561637 NBPF26B4DH59 902 aa33.45■■■□□ 2.95
NME3-202ENST00000561637 NBPF10Q6P3W6 841 aaKnown RBP33.45■■■□□ 2.95
NME3-202ENST00000561637 NBPF15Q8N660 670 aa33.45■■■□□ 2.95
NME3-202ENST00000561637 ERFEQ4G0M1 354 aa33.44■■■□□ 2.94
NME3-202ENST00000561637 SLX4Q8IY92 1834 aa33.44■■■□□ 2.94
NME3-202ENST00000561637 POTEIP0CG38 1075 aa33.42■■■□□ 2.94
NME3-202ENST00000561637 POTEJP0CG39 1038 aa33.42■■■□□ 2.94
NME3-202ENST00000561637 CCDC146Q8IYE0 955 aa33.42■■■□□ 2.94
NME3-202ENST00000561637 BCORQ6W2J9 1755 aa33.42■■■□□ 2.94
NME3-202ENST00000561637 PRR5LQ6MZQ0 368 aa33.41■■■□□ 2.94
NME3-202ENST00000561637 DZIP3Q86Y13 1208 aaKnown RBP33.41■■■□□ 2.94
NME3-202ENST00000561637 BRIP1Q9BX63 1249 aa33.4■■■□□ 2.94
NME3-202ENST00000561637 MKRN1Q9UHC7 482 aaKnown RBP33.4■■■□□ 2.94
NME3-202ENST00000561637 RRP7AQ9Y3A4 280 aaKnown RBP33.39■■■□□ 2.94
NME3-202ENST00000561637 PDE6BP35913 854 aa33.38■■■□□ 2.93
NME3-202ENST00000561637 CHADLQ6NUI6 762 aa33.38■■■□□ 2.93
NME3-202ENST00000561637 DDNO94850 711 aaPredicted RBP33.37■■■□□ 2.93
NME3-202ENST00000561637 EIF4A1P60842 406 aaKnown RBP33.37■■■□□ 2.93
NME3-202ENST00000561637 CREBZFQ9NS37 354 aa33.37■■■□□ 2.93
NME3-202ENST00000561637 LAMB4A4D0S4 1761 aa33.37■■■□□ 2.93
NME3-202ENST00000561637 RIPK4P57078 832 aa33.36■■■□□ 2.93
NME3-202ENST00000561637 PNNQ9H307 717 aaKnown RBP33.36■■■□□ 2.93
NME3-202ENST00000561637 ARFGEF2Q9Y6D5 1785 aa33.35■■■□□ 2.93
NME3-202ENST00000561637 TMPOP42166 694 aaKnown RBP33.35■■■□□ 2.93
NME3-202ENST00000561637 PRKRIP1Q9H875 184 aaPredicted RBP33.35■■■□□ 2.93
NME3-202ENST00000561637 PDZRN3Q9UPQ7 1066 aa33.35■■■□□ 2.93
NME3-202ENST00000561637 LTBP3Q9NS15 1303 aa33.34■■■□□ 2.93
NME3-202ENST00000561637 NPM2Q86SE8 214 aaKnown RBP33.34■■■□□ 2.93
NME3-202ENST00000561637 PNISRQ8TF01 805 aaKnown RBP33.34■■■□□ 2.93
NME3-202ENST00000561637 TAOK3Q9H2K8 898 aa33.34■■■□□ 2.93
NME3-202ENST00000561637 NEUROD2Q15784 382 aa33.3■■■□□ 2.92
NME3-202ENST00000561637 NGEFQ8N5V2 710 aa33.3■■■□□ 2.92
NME3-202ENST00000561637 FOXN1O15353 648 aa33.29■■■□□ 2.92
NME3-202ENST00000561637 SETDB2Q96T68 719 aa33.29■■■□□ 2.92
NME3-202ENST00000561637 ADAMTS8Q9UP79 889 aa33.29■■■□□ 2.92
NME3-202ENST00000561637 SCN4AP35499 1836 aa33.29■■■□□ 2.92
NME3-202ENST00000561637 PRPF40BQ6NWY9 871 aaKnown RBP33.28■■■□□ 2.92
NME3-202ENST00000561637 TSPYL4Q9UJ04 414 aa33.28■■■□□ 2.92
NME3-202ENST00000561637 SRGNP10124 158 aa33.27■■■□□ 2.92
NME3-202ENST00000561637 WDR43Q15061 677 aaKnown RBP eCLIP33.27■■■□□ 2.92
NME3-202ENST00000561637 HLFQ16534 295 aa33.27■■■□□ 2.92
NME3-202ENST00000561637 CNBD1Q8NA66 436 aa33.27■■■□□ 2.92
NME3-202ENST00000561637 CNKSR1Q969H4 720 aa33.27■■■□□ 2.92
NME3-202ENST00000561637 CNTNAP1P78357 1384 aa33.26■■■□□ 2.92
NME3-202ENST00000561637 STYK1Q6J9G0 422 aa33.26■■■□□ 2.91
NME3-202ENST00000561637 PASKQ96RG2 1323 aa33.26■■■□□ 2.91
NME3-202ENST00000561637 TTLL7Q6ZT98 887 aa33.24■■■□□ 2.91
NME3-202ENST00000561637 MYL6BP14649 208 aa33.23■■■□□ 2.91
NME3-202ENST00000561637 RUNDC1Q96C34 613 aa33.23■■■□□ 2.91
NME3-202ENST00000561637 MASTLQ96GX5 879 aa33.23■■■□□ 2.91
NME3-202ENST00000561637 TRIM35Q9UPQ4 493 aa33.23■■■□□ 2.91
NME3-202ENST00000561637 FAM177BA6PVY3 158 aa33.22■■■□□ 2.91
NME3-202ENST00000561637 NPHP1O15259 732 aa33.22■■■□□ 2.91
NME3-202ENST00000561637 CLEC4GQ6UXB4 293 aa33.22■■■□□ 2.91
NME3-202ENST00000561637 ST5P78524 1137 aa33.21■■■□□ 2.91
NME3-202ENST00000561637 C7orf43Q8WVR3 580 aa33.21■■■□□ 2.91
NME3-202ENST00000561637 TAF1DQ9H5J8 278 aaPredicted RBP33.21■■■□□ 2.91
NME3-202ENST00000561637 NIP7Q9Y221 180 aaKnown RBP eCLIP33.21■■■□□ 2.91
NME3-202ENST00000561637 LDHDQ86WU2 507 aa33.2■■■□□ 2.91
NME3-202ENST00000561637 NBPF5PQ86XG9 351 aaPredicted RBP33.2■■■□□ 2.91
NME3-202ENST00000561637 L3MBTL3Q96JM7 780 aaPredicted RBP33.2■■■□□ 2.91
NME3-202ENST00000561637 ZNF652Q9Y2D9 606 aa33.2■■■□□ 2.91
NME3-202ENST00000561637 KRT24Q2M2I5 525 aa33.19■■■□□ 2.9
NME3-202ENST00000561637 SOGA3Q5TF21 947 aa33.19■■■□□ 2.9
NME3-202ENST00000561637 IQCA1LA6NCM1 817 aa33.18■■■□□ 2.9
NME3-202ENST00000561637 ITGBL1O95965 494 aaPredicted RBP33.18■■■□□ 2.9
NME3-202ENST00000561637 VEGFBP49765 207 aa33.18■■■□□ 2.9
NME3-202ENST00000561637 LMOD3Q0VAK6 560 aa33.18■■■□□ 2.9
NME3-202ENST00000561637 ANXA1P04083 346 aa33.17■■■□□ 2.9
NME3-202ENST00000561637 PROSER3Q2NL68 480 aa33.17■■■□□ 2.9
NME3-202ENST00000561637 CCDC184Q52MB2 194 aa33.17■■■□□ 2.9
NME3-202ENST00000561637 PRDM10Q9NQV6 1147 aa33.17■■■□□ 2.9
NME3-202ENST00000561637 ADAMTSL1Q8N6G6 1762 aa33.16■■■□□ 2.9
NME3-202ENST00000561637 EIF2S2P20042 333 aaKnown RBP33.16■■■□□ 2.9
NME3-202ENST00000561637 ZNF541Q9H0D2 1346 aa33.16■■■□□ 2.9
NME3-202ENST00000561637 PDIA6Q15084 440 aa33.15■■■□□ 2.9
NME3-202ENST00000561637 OLFM4Q6UX06 510 aa33.15■■■□□ 2.9
NME3-202ENST00000561637 NECTIN2Q92692 538 aa33.15■■■□□ 2.9
NME3-202ENST00000561637 ZBTB3Q9H5J0 574 aa33.15■■■□□ 2.9
NME3-202ENST00000561637 MAP3K15Q6ZN16 1313 aa33.14■■■□□ 2.9
NME3-202ENST00000561637 TMEM88BA6NKF7 163 aa33.14■■■□□ 2.9
NME3-202ENST00000561637 EAPPQ56P03 285 aaPredicted RBP33.14■■■□□ 2.9
NME3-202ENST00000561637 LRP10Q7Z4F1 713 aa33.14■■■□□ 2.9
NME3-202ENST00000561637 LAS1LQ9Y4W2 734 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms