RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 TWISTNBQ3B726 338 aaPredicted RBP9.63□□□□□ -0.87
TPM1-231ENST00000561395 B4GALNT3Q6L9W6 998 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 TSPYL6Q8N831 410 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 RRAGCQ9HB90 399 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 BABAM1Q9NWV8 329 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
TPM1-231ENST00000561395 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
TPM1-231ENST00000561395 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
TPM1-231ENST00000561395 C8orf58Q8NAV2 365 aa9.62□□□□□ -0.87
TPM1-231ENST00000561395 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
TPM1-231ENST00000561395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.875e-8■■■■□ 19.9
TPM1-231ENST00000561395 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
TPM1-231ENST00000561395 PCDH11XQ9BZA7 1347 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 PCDH11YQ9BZA8 1340 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 MRC1P22897 1456 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 TAF7Q15545 349 aaPredicted RBP9.61□□□□□ -0.87
TPM1-231ENST00000561395 C1orf141Q5JVX7 400 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 ZKSCAN2Q63HK3 967 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 MRPL50Q8N5N7 158 aaKnown RBP9.61□□□□□ -0.87
TPM1-231ENST00000561395 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
TPM1-231ENST00000561395 CCDC136Q96JN2 1154 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 PCDH10Q9P2E7 1040 aa9.61□□□□□ -0.87
TPM1-231ENST00000561395 KDM6AO15550 1401 aaPredicted RBP9.6□□□□□ -0.87
TPM1-231ENST00000561395 GNPATO15228 680 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
TPM1-231ENST00000561395 MS4A1P11836 297 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 DPEP1P16444 411 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 LINC00116Q8NCU8 138 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
TPM1-231ENST00000561395 CACNA1SQ13698 1873 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 SOS1Q07889 1333 aaPredicted RBP9.59□□□□□ -0.87
TPM1-231ENST00000561395 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 ELL2O00472 640 aaPredicted RBP9.59□□□□□ -0.87
TPM1-231ENST00000561395 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
TPM1-231ENST00000561395 RLBP1P12271 317 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 TRIM27P14373 513 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 KRT24Q2M2I5 525 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 ATF7IPQ6VMQ6 1270 aa9.59□□□□□ -0.87
TPM1-231ENST00000561395 NOB1Q9ULX3 412 aaKnown RBP9.59□□□□□ -0.87
TPM1-231ENST00000561395 LOC102724428A0A0B4J2F2 783 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 PHKG2P15735 406 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 SIK1P57059 783 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 TEFQ10587 303 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 AAMPQ13685 434 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 FTSJ3Q8IY81 847 aaKnown RBP9.58□□□□□ -0.88
TPM1-231ENST00000561395 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
TPM1-231ENST00000561395 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 CCDC87Q9NVE4 849 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
TPM1-231ENST00000561395 CYP27B1O15528 508 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 KCNA3P22001 575 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 ITPK1Q13572 414 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 MVPQ14764 893 aaKnown RBP9.57□□□□□ -0.88
TPM1-231ENST00000561395 FAM161AQ3B820 660 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 IFNL2Q8IZJ0 200 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
TPM1-231ENST00000561395 FOXN1O15353 648 aa9.56□□□□□ -0.88
TPM1-231ENST00000561395 HSP90AB1P08238 724 aaKnown RBP9.56□□□□□ -0.88
TPM1-231ENST00000561395 PIGBQ92521 554 aa9.56□□□□□ -0.88
TPM1-231ENST00000561395 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
TPM1-231ENST00000561395 ABCC4O15439 1325 aa9.56□□□□□ -0.88
TPM1-231ENST00000561395 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
TPM1-231ENST00000561395 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 BTBD11A6QL63 1104 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
TPM1-231ENST00000561395 HOXB7P09629 217 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
TPM1-231ENST00000561395 DALRD3Q5D0E6 543 aaKnown RBP9.55□□□□□ -0.88
TPM1-231ENST00000561395 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 UBR2Q8IWV8 1755 aa9.55□□□□□ -0.88
TPM1-231ENST00000561395 TJP1Q07157 1748 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 NRXN2Q9P2S2 1712 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 HEG1Q9ULI3 1381 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 VEGFAP15692 232 aaPredicted RBP9.54□□□□□ -0.88
TPM1-231ENST00000561395 ATP6V1AP38606 617 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 RASSF7Q02833 373 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 TMEM57Q8N5G2 664 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 API5Q9BZZ5 524 aaKnown RBP9.54□□□□□ -0.88
TPM1-231ENST00000561395 SLC52A2Q9HAB3 445 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 PRDM10Q9NQV6 1147 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
TPM1-231ENST00000561395 RTCBQ9Y3I0 505 aaKnown RBP9.54□□□□□ -0.88
TPM1-231ENST00000561395 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 PTPRCP08575 1304 aa9.54□□□□□ -0.88
TPM1-231ENST00000561395 KCNQ3O43525 872 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 GYS1P13807 737 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 CCDC30Q5VVM6 783 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 ITPRIPQ8IWB1 547 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
TPM1-231ENST00000561395 SCN4AP35499 1836 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms