RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 EFSO43281 561 aa10.46□□□□□ -0.73
HMBOX1-216ENST00000561377 LRRC69Q6ZNQ3 347 aa10.46□□□□□ -0.73
HMBOX1-216ENST00000561377 TSEN2Q8NCE0 465 aaKnown RBP10.46□□□□□ -0.73
HMBOX1-216ENST00000561377 HCN2Q9UL51 889 aa10.46□□□□□ -0.73
HMBOX1-216ENST00000561377 PRR12Q9ULL5 1215 aa10.46□□□□□ -0.73
HMBOX1-216ENST00000561377 PIK3R2O00459 728 aa10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 HIRAP54198 1017 aaPredicted RBP10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 SH3PXD2AQ5TCZ1 1133 aa10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 PPP1R12CQ9BZL4 782 aa10.45□□□□□ -0.74
HMBOX1-216ENST00000561377 PPP1R12BO60237 982 aaPredicted RBP10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 DKK1O94907 266 aa10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 SEC13P55735 322 aa10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 ZNF468Q5VIY5 522 aaPredicted RBP10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 BTBD6Q96KE9 485 aa10.44□□□□□ -0.74
HMBOX1-216ENST00000561377 ALYREFQ86V81 257 aaKnown RBP10.43□□□□□ -0.74
HMBOX1-216ENST00000561377 PHACTR1Q9C0D0 580 aa10.43□□□□□ -0.74
HMBOX1-216ENST00000561377 ANKIB1Q9P2G1 1089 aa10.43□□□□□ -0.74
HMBOX1-216ENST00000561377 HCN4Q9Y3Q4 1203 aa10.43□□□□□ -0.74
HMBOX1-216ENST00000561377 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
HMBOX1-216ENST00000561377 STRN4Q9NRL3 753 aa10.42□□□□□ -0.74
HMBOX1-216ENST00000561377 KLF15Q9UIH9 416 aa10.42□□□□□ -0.74
HMBOX1-216ENST00000561377 PLA2G4EQ3MJ16 856 aa10.41□□□□□ -0.74
HMBOX1-216ENST00000561377 FCHSD1Q86WN1 690 aa10.41□□□□□ -0.74
HMBOX1-216ENST00000561377 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.74
HMBOX1-216ENST00000561377 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.74
HMBOX1-216ENST00000561377 PCBP4P57723 403 aaKnown RBP10.4□□□□□ -0.74
HMBOX1-216ENST00000561377 CHSY3Q70JA7 882 aa10.4□□□□□ -0.74
HMBOX1-216ENST00000561377 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
HMBOX1-216ENST00000561377 GNB5O14775 395 aa10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 C21orf2O43822 256 aa10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 PTK7Q13308 1070 aa10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 KANK4Q5T7N3 995 aaPredicted RBP10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 LINC00114Q6XXX2 140 aa10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
HMBOX1-216ENST00000561377 FAM196BA6NMK8 535 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 MSTNO14793 375 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 DGKGP49619 791 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 DPYDQ12882 1025 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 HIF1AQ16665 826 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 CRTC2Q53ET0 693 aaPredicted RBP10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 C2orf49Q9BVC5 232 aaPredicted RBP10.38□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L15C9J2P7 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L13C9JLJ4 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L11C9JVI0 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L21D6R901 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L18D6R9N7 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L22D6RA61 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L17D6RBQ6 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L19D6RCP7 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L20D6RJB6 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 USP17L24Q0WX57 530 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 SFSWAPQ12872 951 aaKnown RBP10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 SYT9Q86SS6 491 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 ALDH16A1Q8IZ83 802 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
HMBOX1-216ENST00000561377 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 SUSD3Q96L08 255 aa10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 BRD7Q9NPI1 651 aa10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 NOP53Q9NZM5 478 aaKnown RBP10.36□□□□□ -0.75
HMBOX1-216ENST00000561377 ELOA3CA0A087WX78 387 aaPredicted RBP10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 ELOA3DA6NLF2 546 aaPredicted RBP10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 SIN3BO75182 1162 aa10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 ALAS2P22557 587 aa10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 COL8A1P27658 744 aa10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 ELOA3BQ3SY89 546 aa10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 ELOA3Q8NG57 546 aa10.35□□□□□ -0.75
HMBOX1-216ENST00000561377 KCNQ4P56696 695 aa10.34□□□□□ -0.75
HMBOX1-216ENST00000561377 SPOCK3Q9BQ16 436 aa10.34□□□□□ -0.75
HMBOX1-216ENST00000561377 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
HMBOX1-216ENST00000561377 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
HMBOX1-216ENST00000561377 KRBA1A5PL33 1030 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 ITGB2P05107 769 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 IGFBP4P22692 258 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 TYRO3Q06418 890 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 ZNF280CQ8ND82 737 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 NGLY1Q96IV0 654 aa10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
HMBOX1-216ENST00000561377 SLC30A3Q99726 388 aa10.32□□□□□ -0.76
HMBOX1-216ENST00000561377 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
HMBOX1-216ENST00000561377 RTN1Q16799 776 aa10.31□□□□□ -0.76
HMBOX1-216ENST00000561377 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
HMBOX1-216ENST00000561377 CFAP70Q5T0N1 1121 aa10.3□□□□□ -0.76
HMBOX1-216ENST00000561377 BTLAQ7Z6A9 289 aa10.3□□□□□ -0.76
HMBOX1-216ENST00000561377 MDFIQ99750 246 aa10.3□□□□□ -0.76
HMBOX1-216ENST00000561377 IER5Q5VY09 327 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms