RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
USP8-216ENST00000561206 MTFR1Q15390 333 aa9.02□□□□□ -0.97
USP8-216ENST00000561206 GDF10P55107 478 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 TSGA10IPQ3SY00 556 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 SLC4A9Q96Q91 983 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
USP8-216ENST00000561206 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
USP8-216ENST00000561206 CDK2AP1O14519 115 aa9□□□□□ -0.97
USP8-216ENST00000561206 GJA3Q9Y6H8 435 aa9□□□□□ -0.97
USP8-216ENST00000561206 ILDR2Q71H61 639 aa8.99□□□□□ -0.97
USP8-216ENST00000561206 TP53INP1Q96A56 240 aa8.99□□□□□ -0.97
USP8-216ENST00000561206 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
USP8-216ENST00000561206 ADH7P40394 386 aa8.98□□□□□ -0.97
USP8-216ENST00000561206 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
USP8-216ENST00000561206 TRAPPC3LQ5T215 181 aa8.96□□□□□ -0.98
USP8-216ENST00000561206 GPC6Q9Y625 555 aaPredicted RBP8.96□□□□□ -0.98
USP8-216ENST00000561206 A6NJY4 79 aa8.95□□□□□ -0.98
USP8-216ENST00000561206 PCMTD1Q96MG8 357 aaPredicted RBP8.95□□□□□ -0.98
USP8-216ENST00000561206 SLC30A3Q99726 388 aa8.95□□□□□ -0.98
USP8-216ENST00000561206 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
USP8-216ENST00000561206 LILRB5O75023 590 aa8.94□□□□□ -0.98
USP8-216ENST00000561206 SLC51AQ86UW1 340 aa8.94□□□□□ -0.98
USP8-216ENST00000561206 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
USP8-216ENST00000561206 TMEM229AB2RXF0 380 aa8.93□□□□□ -0.98
USP8-216ENST00000561206 BANK1Q8NDB2 785 aa8.93□□□□□ -0.98
USP8-216ENST00000561206 RAC1P63000 192 aa8.92□□□□□ -0.98
USP8-216ENST00000561206 SHISA2Q6UWI4 295 aa8.92□□□□□ -0.98
USP8-216ENST00000561206 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
USP8-216ENST00000561206 EML1O00423 815 aa8.91□□□□□ -0.98
USP8-216ENST00000561206 SFSWAPQ12872 951 aaKnown RBP8.91□□□□□ -0.98
USP8-216ENST00000561206 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
USP8-216ENST00000561206 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
USP8-216ENST00000561206 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
USP8-216ENST00000561206 KRTAP4-9Q9BYQ8 210 aa8.91□□□□□ -0.98
USP8-216ENST00000561206 TXLNAP40222 546 aa8.9□□□□□ -0.98
USP8-216ENST00000561206 SPEM2Q0P670 501 aa8.9□□□□□ -0.98
USP8-216ENST00000561206 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
USP8-216ENST00000561206 FMR1NBQ8N0W7 255 aaPredicted RBP8.9□□□□□ -0.98
USP8-216ENST00000561206 CABP1Q9NZU7 370 aa8.9□□□□□ -0.98
USP8-216ENST00000561206 KCNQ4P56696 695 aa8.89□□□□□ -0.99
USP8-216ENST00000561206 LRRC69Q6ZNQ3 347 aa8.88□□□□□ -0.99
USP8-216ENST00000561206 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
USP8-216ENST00000561206 PCMTD2Q9NV79 361 aa8.88□□□□□ -0.99
USP8-216ENST00000561206 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
USP8-216ENST00000561206 APBB1O00213 710 aa8.87□□□□□ -0.99
USP8-216ENST00000561206 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
USP8-216ENST00000561206 FZD5Q13467 585 aa8.87□□□□□ -0.99
USP8-216ENST00000561206 MAP7D1Q3KQU3 841 aa8.87□□□□□ -0.99
USP8-216ENST00000561206 TEAD4Q15561 434 aa8.86□□□□□ -0.99
USP8-216ENST00000561206 SCHIP1Q9P0W5 487 aaPredicted RBP8.86□□□□□ -0.99
USP8-216ENST00000561206 USP21Q9UK80 565 aa8.86□□□□□ -0.99
USP8-216ENST00000561206 CD97P48960 835 aa8.85□□□□□ -0.99
USP8-216ENST00000561206 PARP3Q9Y6F1 533 aa8.85□□□□□ -0.99
USP8-216ENST00000561206 IRAK1P51617 712 aa8.84□□□□□ -0.99
USP8-216ENST00000561206 AFF1P51825 1210 aaKnown RBP8.84□□□□□ -0.99
USP8-216ENST00000561206 PRR23CQ6ZRP0 262 aa8.84□□□□□ -0.99
USP8-216ENST00000561206 DTWD1Q8N5C7 304 aa8.84□□□□□ -0.99
USP8-216ENST00000561206 WFDC12Q8WWY7 111 aa8.84□□□□□ -0.99
USP8-216ENST00000561206 L3MBTL2Q969R5 705 aa8.84□□□□□ -0.99
USP8-216ENST00000561206 KRTAP4-2Q9BYR5 136 aa8.82□□□□□ -1
USP8-216ENST00000561206 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
USP8-216ENST00000561206 SLC6A14Q9UN76 642 aa8.82□□□□□ -1
USP8-216ENST00000561206 BACH1O14867 736 aa8.81□□□□□ -1
USP8-216ENST00000561206 NOS3P29474 1203 aa8.81□□□□□ -1
USP8-216ENST00000561206 NOS2P35228 1153 aa8.81□□□□□ -1
USP8-216ENST00000561206 RAB44Q7Z6P3 723 aaPredicted RBP8.81□□□□□ -1
USP8-216ENST00000561206 EFCC1Q9HA90 598 aa8.81□□□□□ -1
USP8-216ENST00000561206 PCDHGA11Q9Y5H2 935 aa8.81□□□□□ -1
USP8-216ENST00000561206 TAL1P17542 331 aaPredicted RBP8.8□□□□□ -1
USP8-216ENST00000561206 EPHA4P54764 986 aa8.8□□□□□ -1
USP8-216ENST00000561206 FBXO11Q86XK2 927 aa8.8□□□□□ -1
USP8-216ENST00000561206 PLPP7Q8NBV4 271 aa8.8□□□□□ -1
USP8-216ENST00000561206 NEUROD4Q9HD90 331 aa8.8□□□□□ -1
USP8-216ENST00000561206 BRD7Q9NPI1 651 aa8.8□□□□□ -1
USP8-216ENST00000561206 KIAA1324LA8MWY0 1029 aaPredicted RBP8.79□□□□□ -1
USP8-216ENST00000561206 MEGF10Q96KG7 1140 aa8.79□□□□□ -1
USP8-216ENST00000561206 KCNH4Q9UQ05 1017 aa8.79□□□□□ -1
USP8-216ENST00000561206 IREB2P48200 963 aaKnown RBP8.78□□□□□ -1
USP8-216ENST00000561206 DMRTC2Q8IXT2 367 aaPredicted RBP8.78□□□□□ -1
USP8-216ENST00000561206 RNF114Q9Y508 228 aa8.78□□□□□ -1
USP8-216ENST00000561206 OAS3Q9Y6K5 1087 aaKnown RBP8.78□□□□□ -1
USP8-216ENST00000561206 FSTP19883 344 aa8.77□□□□□ -1.01
USP8-216ENST00000561206 TYRO3Q06418 890 aa8.77□□□□□ -1.01
USP8-216ENST00000561206 C1orf53Q5VUE5 145 aa8.77□□□□□ -1.01
USP8-216ENST00000561206 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
USP8-216ENST00000561206 DZIP1LQ8IYY4 767 aaKnown RBP8.77□□□□□ -1.01
USP8-216ENST00000561206 SNRKQ9NRH2 765 aa8.77□□□□□ -1.01
USP8-216ENST00000561206 SSTR4P31391 388 aa8.76□□□□□ -1.01
USP8-216ENST00000561206 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
USP8-216ENST00000561206 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
USP8-216ENST00000561206 NAGPAQ9UK23 515 aa8.76□□□□□ -1.01
USP8-216ENST00000561206 IRF5Q13568 498 aa8.75□□□□□ -1.01
USP8-216ENST00000561206 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
USP8-216ENST00000561206 PSAPL1Q6NUJ1 521 aa8.75□□□□□ -1.01
USP8-216ENST00000561206 CEP63Q96MT8 703 aa8.75□□□□□ -1.01
USP8-216ENST00000561206 UBE2OQ9C0C9 1292 aaKnown RBP8.75□□□□□ -1.01
USP8-216ENST00000561206 ANKIB1Q9P2G1 1089 aa8.75□□□□□ -1.01
USP8-216ENST00000561206 HIRAP54198 1017 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms