RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 FAM177BA6PVY3 158 aa35.86■■■■□ 3.33
SNRPA1-215ENST00000561187 NBPF5PQ86XG9 351 aaPredicted RBP35.86■■■■□ 3.33
SNRPA1-215ENST00000561187 RBM46Q8TBY0 533 aaKnown RBP35.85■■■■□ 3.33
SNRPA1-215ENST00000561187 APLP1P51693 650 aa35.84■■■■□ 3.33
SNRPA1-215ENST00000561187 PLEKHF1Q96S99 279 aa35.84■■■■□ 3.33
SNRPA1-215ENST00000561187 ZNF652Q9Y2D9 606 aa35.84■■■■□ 3.33
SNRPA1-215ENST00000561187 KDM3BQ7LBC6 1761 aa35.84■■■■□ 3.33
SNRPA1-215ENST00000561187 NGEFQ8N5V2 710 aa35.83■■■■□ 3.33
SNRPA1-215ENST00000561187 NFE2L2Q16236 605 aa35.82■■■■□ 3.32
SNRPA1-215ENST00000561187 MAPK8IP3Q9UPT6 1336 aa35.82■■■■□ 3.32
SNRPA1-215ENST00000561187 SLX4Q8IY92 1834 aa35.81■■■■□ 3.32
SNRPA1-215ENST00000561187 HTRA3P83110 453 aa35.81■■■■□ 3.32
SNRPA1-215ENST00000561187 PDZRN3Q9UPQ7 1066 aa35.81■■■■□ 3.32
SNRPA1-215ENST00000561187 NIP7Q9Y221 180 aaKnown RBP eCLIP35.81■■■■□ 3.32
SNRPA1-215ENST00000561187 ZC3H4Q9UPT8 1303 aaKnown RBP35.8■■■■□ 3.32
SNRPA1-215ENST00000561187 PRPF40BQ6NWY9 871 aaKnown RBP35.79■■■■□ 3.32
SNRPA1-215ENST00000561187 CLEC4GQ6UXB4 293 aa35.79■■■■□ 3.32
SNRPA1-215ENST00000561187 FER1L6Q2WGJ9 1857 aa35.78■■■■□ 3.32
SNRPA1-215ENST00000561187 SRGNP10124 158 aa35.78■■■■□ 3.32
SNRPA1-215ENST00000561187 HLFQ16534 295 aa35.78■■■■□ 3.32
SNRPA1-215ENST00000561187 WDR90Q96KV7 1748 aa35.77■■■■□ 3.32
SNRPA1-215ENST00000561187 GLTPD2A6NH11 291 aa35.76■■■■□ 3.32
SNRPA1-215ENST00000561187 STYK1Q6J9G0 422 aa35.76■■■■□ 3.32
SNRPA1-215ENST00000561187 CNKSR1Q969H4 720 aa35.76■■■■□ 3.32
SNRPA1-215ENST00000561187 PNISRQ8TF01 805 aaKnown RBP35.75■■■■□ 3.31
SNRPA1-215ENST00000561187 MASTLQ96GX5 879 aa35.75■■■■□ 3.31
SNRPA1-215ENST00000561187 TAOK3Q9H2K8 898 aa35.74■■■■□ 3.31
SNRPA1-215ENST00000561187 RRP7AQ9Y3A4 280 aaKnown RBP35.74■■■■□ 3.31
SNRPA1-215ENST00000561187 ARFGEF2Q9Y6D5 1785 aa35.74■■■■□ 3.31
SNRPA1-215ENST00000561187 EIF4A1P60842 406 aaKnown RBP35.73■■■■□ 3.31
SNRPA1-215ENST00000561187 ERFEQ4G0M1 354 aa35.73■■■■□ 3.31
SNRPA1-215ENST00000561187 MYL6BP14649 208 aa35.72■■■■□ 3.31
SNRPA1-215ENST00000561187 FSTL1Q12841 308 aa35.72■■■■□ 3.31
SNRPA1-215ENST00000561187 TPTE2Q6XPS3 522 aa35.69■■■■□ 3.3
SNRPA1-215ENST00000561187 TTLL7Q6ZT98 887 aa35.69■■■■□ 3.3
SNRPA1-215ENST00000561187 DICER1Q9UPY3 1922 aaKnown RBP35.69■■■■□ 3.3
SNRPA1-215ENST00000561187 VEGFAP15692 232 aaPredicted RBP35.68■■■■□ 3.3
SNRPA1-215ENST00000561187 GTF2E1P29083 439 aaPredicted RBP35.68■■■■□ 3.3
SNRPA1-215ENST00000561187 DDX10Q13206 875 aaKnown RBP35.68■■■■□ 3.3
SNRPA1-215ENST00000561187 SMC1BQ8NDV3 1235 aa35.68■■■■□ 3.3
SNRPA1-215ENST00000561187 PNNQ9H307 717 aaKnown RBP35.68■■■■□ 3.3
SNRPA1-215ENST00000561187 OLFM4Q6UX06 510 aa35.67■■■■□ 3.3
SNRPA1-215ENST00000561187 DNAJC5GQ8N7S2 189 aa35.67■■■■□ 3.3
SNRPA1-215ENST00000561187 TSPYL4Q9UJ04 414 aa35.67■■■■□ 3.3
SNRPA1-215ENST00000561187 ABCC12Q96J65 1359 aa35.66■■■■□ 3.3
SNRPA1-215ENST00000561187 NPR1P16066 1061 aa35.66■■■■□ 3.3
SNRPA1-215ENST00000561187 KIF6Q6ZMV9 814 aa35.66■■■■□ 3.3
SNRPA1-215ENST00000561187 NUTM1Q86Y26 1132 aa35.66■■■■□ 3.3
SNRPA1-215ENST00000561187 ZBTB3Q9H5J0 574 aa35.66■■■■□ 3.3
SNRPA1-215ENST00000561187 LTBP3Q9NS15 1303 aa35.65■■■■□ 3.3
SNRPA1-215ENST00000561187 GPTP24298 496 aa35.65■■■■□ 3.3
SNRPA1-215ENST00000561187 RALBP1Q15311 655 aa35.65■■■■□ 3.3
SNRPA1-215ENST00000561187 NUP98P52948 1817 aa35.64■■■■□ 3.3
SNRPA1-215ENST00000561187 RIPK4P57078 832 aa35.64■■■■□ 3.3
SNRPA1-215ENST00000561187 DPY19L2Q6NUT2 758 aa35.64■■■■□ 3.3
SNRPA1-215ENST00000561187 MAP3K15Q6ZN16 1313 aa35.63■■■■□ 3.29
SNRPA1-215ENST00000561187 SOGA3Q5TF21 947 aa35.63■■■■□ 3.29
SNRPA1-215ENST00000561187 CCDC146Q8IYE0 955 aa35.63■■■■□ 3.29
SNRPA1-215ENST00000561187 CCDC93Q567U6 631 aa35.62■■■■□ 3.29
SNRPA1-215ENST00000561187 POTECB2RU33 542 aa35.61■■■■□ 3.29
SNRPA1-215ENST00000561187 RGL2O15211 777 aa35.61■■■■□ 3.29
SNRPA1-215ENST00000561187 C7orf43Q8WVR3 580 aa35.6■■■■□ 3.29
SNRPA1-215ENST00000561187 KLRG2A4D1S0 409 aaPredicted RBP35.59■■■■□ 3.29
SNRPA1-215ENST00000561187 DDNO94850 711 aaPredicted RBP35.59■■■■□ 3.29
SNRPA1-215ENST00000561187 EIF2S2P20042 333 aaKnown RBP35.59■■■■□ 3.29
SNRPA1-215ENST00000561187 UBN2Q6ZU65 1347 aa35.58■■■■□ 3.29
SNRPA1-215ENST00000561187 ERVV-1B6SEH8 477 aa35.58■■■■□ 3.29
SNRPA1-215ENST00000561187 NEUROD2Q15784 382 aa35.58■■■■□ 3.29
SNRPA1-215ENST00000561187 ZNF277Q9NRM2 450 aaPredicted RBP35.58■■■■□ 3.29
SNRPA1-215ENST00000561187 ANXA1P04083 346 aa35.57■■■■□ 3.28
SNRPA1-215ENST00000561187 TMPOP42166 694 aaKnown RBP35.57■■■■□ 3.28
SNRPA1-215ENST00000561187 MYBBP1AQ9BQG0 1328 aaKnown RBP35.57■■■■□ 3.28
SNRPA1-215ENST00000561187 NECTIN2Q92692 538 aa35.56■■■■□ 3.28
SNRPA1-215ENST00000561187 KLRG1Q96E93 195 aa35.56■■■■□ 3.28
SNRPA1-215ENST00000561187 NYXQ9GZU5 481 aa35.56■■■■□ 3.28
SNRPA1-215ENST00000561187 FKBP4Q02790 459 aaKnown RBP eCLIP35.53■■■■□ 3.28
SNRPA1-215ENST00000561187 PROSER3Q2NL68 480 aa35.53■■■■□ 3.28
SNRPA1-215ENST00000561187 SUSD4Q5VX71 490 aa35.53■■■■□ 3.28
SNRPA1-215ENST00000561187 IFFO2Q5TF58 517 aa35.52■■■■□ 3.28
SNRPA1-215ENST00000561187 POTEIP0CG38 1075 aa35.51■■■■□ 3.28
SNRPA1-215ENST00000561187 POTEJP0CG39 1038 aa35.51■■■■□ 3.28
SNRPA1-215ENST00000561187 SLC51AQ86UW1 340 aa35.51■■■■□ 3.28
SNRPA1-215ENST00000561187 LMOD3Q0VAK6 560 aa35.5■■■■□ 3.27
SNRPA1-215ENST00000561187 ERBB4Q15303 1308 aa35.5■■■■□ 3.27
SNRPA1-215ENST00000561187 ZNF541Q9H0D2 1346 aa35.5■■■■□ 3.27
SNRPA1-215ENST00000561187 ALDH1B1P30837 517 aa35.49■■■■□ 3.27
SNRPA1-215ENST00000561187 RPGRQ92834 1020 aaKnown RBP35.49■■■■□ 3.27
SNRPA1-215ENST00000561187 LAS1LQ9Y4W2 734 aaKnown RBP35.49■■■■□ 3.27
SNRPA1-215ENST00000561187 PDIA6Q15084 440 aa35.48■■■■□ 3.27
SNRPA1-215ENST00000561187 KRT24Q2M2I5 525 aa35.48■■■■□ 3.27
SNRPA1-215ENST00000561187 CRY2Q49AN0 593 aa35.48■■■■□ 3.27
SNRPA1-215ENST00000561187 NTSR2O95665 410 aa35.47■■■■□ 3.27
SNRPA1-215ENST00000561187 WDR43Q15061 677 aaKnown RBP eCLIP35.47■■■■□ 3.27
SNRPA1-215ENST00000561187 GIGYF2Q6Y7W6 1299 aaKnown RBP35.47■■■■□ 3.27
SNRPA1-215ENST00000561187 ZNF34Q8IZ26 560 aa35.47■■■■□ 3.27
SNRPA1-215ENST00000561187 TCERG1O14776 1098 aaKnown RBP35.46■■■■□ 3.27
SNRPA1-215ENST00000561187 C3orf67Q6ZVT6 689 aa35.46■■■■□ 3.27
SNRPA1-215ENST00000561187 LRP10Q7Z4F1 713 aa35.46■■■■□ 3.27
SNRPA1-215ENST00000561187 RTKN2Q8IZC4 609 aa35.46■■■■□ 3.27
SNRPA1-215ENST00000561187 IBTKQ9P2D0 1353 aaPredicted RBP35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms