RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CLEC4GQ6UXB4 293 aa21.03■□□□□ 0.96
LMX1B-204ENST00000561065 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
LMX1B-204ENST00000561065 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
LMX1B-204ENST00000561065 CEP350Q5VT06 3117 aa21.02■□□□□ 0.95
LMX1B-204ENST00000561065 H0YIN7 160 aa21.02■□□□□ 0.95
LMX1B-204ENST00000561065 KIF3CO14782 793 aa21.02■□□□□ 0.95
LMX1B-204ENST00000561065 TTLL6Q8N841 843 aa21.02■□□□□ 0.95
LMX1B-204ENST00000561065 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
LMX1B-204ENST00000561065 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
LMX1B-204ENST00000561065 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
LMX1B-204ENST00000561065 RGL2O15211 777 aa21■□□□□ 0.95
LMX1B-204ENST00000561065 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
LMX1B-204ENST00000561065 TTLL7Q6ZT98 887 aa21■□□□□ 0.95
LMX1B-204ENST00000561065 RNF181Q9P0P0 153 aa21■□□□□ 0.95
LMX1B-204ENST00000561065 TRIM35Q9UPQ4 493 aa21■□□□□ 0.95
LMX1B-204ENST00000561065 DICER1Q9UPY3 1922 aaKnown RBP20.99■□□□□ 0.95
LMX1B-204ENST00000561065 NFKBIEO00221 500 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 PDE6BP35913 854 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 LRP10Q7Z4F1 713 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 NGEFQ8N5V2 710 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
LMX1B-204ENST00000561065 NIP7Q9Y221 180 aaKnown RBP eCLIP20.99■□□□□ 0.95
LMX1B-204ENST00000561065 ANKRD36CQ5JPF3 1778 aa20.98■□□□□ 0.95
LMX1B-204ENST00000561065 ABCC12Q96J65 1359 aa20.98■□□□□ 0.95
LMX1B-204ENST00000561065 MYL6BP14649 208 aa20.98■□□□□ 0.95
LMX1B-204ENST00000561065 ST5P78524 1137 aa20.98■□□□□ 0.95
LMX1B-204ENST00000561065 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
LMX1B-204ENST00000561065 NBPF5PQ86XG9 351 aaPredicted RBP20.98■□□□□ 0.95
LMX1B-204ENST00000561065 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.95
LMX1B-204ENST00000561065 MAP3K15Q6ZN16 1313 aa20.97■□□□□ 0.95
LMX1B-204ENST00000561065 NMRK2Q9NPI5 230 aa20.97■□□□□ 0.95
LMX1B-204ENST00000561065 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
LMX1B-204ENST00000561065 SRGNP10124 158 aa20.96■□□□□ 0.95
LMX1B-204ENST00000561065 PDIA6Q15084 440 aa20.96■□□□□ 0.95
LMX1B-204ENST00000561065 KRT24Q2M2I5 525 aa20.96■□□□□ 0.95
LMX1B-204ENST00000561065 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
LMX1B-204ENST00000561065 ERBB4Q15303 1308 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 NPHP1O15259 732 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 PROSER3Q2NL68 480 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 BABAM1Q9NWV8 329 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 UBN2Q6ZU65 1347 aa20.95■□□□□ 0.94
LMX1B-204ENST00000561065 ANXA1P04083 346 aa20.94■□□□□ 0.94
LMX1B-204ENST00000561065 STYK1Q6J9G0 422 aa20.94■□□□□ 0.94
LMX1B-204ENST00000561065 ZBTB3Q9H5J0 574 aa20.94■□□□□ 0.94
LMX1B-204ENST00000561065 ZNF219Q9P2Y4 722 aaPredicted RBP20.94■□□□□ 0.94
LMX1B-204ENST00000561065 ERVV-1B6SEH8 477 aa20.93■□□□□ 0.94
LMX1B-204ENST00000561065 C21orf2O43822 256 aa20.93■□□□□ 0.94
LMX1B-204ENST00000561065 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
LMX1B-204ENST00000561065 KLRG2A4D1S0 409 aaPredicted RBP20.92■□□□□ 0.94
LMX1B-204ENST00000561065 CHL1O00533 1208 aa20.92■□□□□ 0.94
LMX1B-204ENST00000561065 EIF2S2P20042 333 aaKnown RBP20.92■□□□□ 0.94
LMX1B-204ENST00000561065 LMNB1P20700 586 aa20.92■□□□□ 0.94
LMX1B-204ENST00000561065 KIF6Q6ZMV9 814 aa20.92■□□□□ 0.94
LMX1B-204ENST00000561065 MASTLQ96GX5 879 aa20.92■□□□□ 0.94
LMX1B-204ENST00000561065 IBTKQ9P2D0 1353 aaPredicted RBP20.92■□□□□ 0.94
LMX1B-204ENST00000561065 CCDC184Q52MB2 194 aa20.91■□□□□ 0.94
LMX1B-204ENST00000561065 LAMB2P55268 1798 aa20.9■□□□□ 0.94
LMX1B-204ENST00000561065 GPTP24298 496 aa20.9■□□□□ 0.94
LMX1B-204ENST00000561065 TPTE2Q6XPS3 522 aa20.9■□□□□ 0.94
LMX1B-204ENST00000561065 NUTM1Q86Y26 1132 aa20.9■□□□□ 0.94
LMX1B-204ENST00000561065 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
LMX1B-204ENST00000561065 NECTIN2Q92692 538 aa20.89■□□□□ 0.93
LMX1B-204ENST00000561065 CNKSR1Q969H4 720 aa20.89■□□□□ 0.93
LMX1B-204ENST00000561065 ZC3H4Q9UPT8 1303 aaKnown RBP20.89■□□□□ 0.93
LMX1B-204ENST00000561065 GIGYF2Q6Y7W6 1299 aaKnown RBP20.88■□□□□ 0.93
LMX1B-204ENST00000561065 C7orf43Q8WVR3 580 aa20.88■□□□□ 0.93
LMX1B-204ENST00000561065 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
LMX1B-204ENST00000561065 SNED1Q8TER0 1413 aa20.88■□□□□ 0.93
LMX1B-204ENST00000561065 NPR1P16066 1061 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 ERFEQ4G0M1 354 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 SUSD4Q5VX71 490 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 ZNF34Q8IZ26 560 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 LTBP3Q9NS15 1303 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 WDR90Q96KV7 1748 aa20.87■□□□□ 0.93
LMX1B-204ENST00000561065 APAF1O14727 1248 aa20.86■□□□□ 0.93
LMX1B-204ENST00000561065 NTSR2O95665 410 aa20.86■□□□□ 0.93
LMX1B-204ENST00000561065 OLFM4Q6UX06 510 aa20.86■□□□□ 0.93
LMX1B-204ENST00000561065 KDM2BQ8NHM5 1336 aa20.86■□□□□ 0.93
LMX1B-204ENST00000561065 TOMM70O94826 608 aa20.85■□□□□ 0.93
LMX1B-204ENST00000561065 HSPA6P17066 643 aa20.85■□□□□ 0.93
LMX1B-204ENST00000561065 CRY2Q49AN0 593 aa20.85■□□□□ 0.93
LMX1B-204ENST00000561065 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
LMX1B-204ENST00000561065 TAOK3Q9H2K8 898 aa20.85■□□□□ 0.93
LMX1B-204ENST00000561065 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
LMX1B-204ENST00000561065 XAGE3Q8WTP9 111 aa20.84■□□□□ 0.93
LMX1B-204ENST00000561065 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
LMX1B-204ENST00000561065 MBIPQ9NS73 344 aa20.84■□□□□ 0.93
LMX1B-204ENST00000561065 ZNF853P0CG23 659 aa20.83■□□□□ 0.93
LMX1B-204ENST00000561065 C3orf67Q6ZVT6 689 aa20.83■□□□□ 0.93
LMX1B-204ENST00000561065 COPS6Q7L5N1 327 aa20.83■□□□□ 0.93
LMX1B-204ENST00000561065 RRAGCQ9HB90 399 aa20.83■□□□□ 0.93
LMX1B-204ENST00000561065 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.93
LMX1B-204ENST00000561065 DDX60Q8IY21 1712 aaKnown RBP20.83■□□□□ 0.92
LMX1B-204ENST00000561065 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
LMX1B-204ENST00000561065 ANP32CO43423 234 aa20.82■□□□□ 0.92
LMX1B-204ENST00000561065 GTF2E1P29083 439 aaPredicted RBP20.82■□□□□ 0.92
LMX1B-204ENST00000561065 DDX21Q9NR30 783 aaKnown RBP eCLIP20.82■□□□□ 0.92
LMX1B-204ENST00000561065 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms