RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
RABGGTA-221ENST00000561055 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
RABGGTA-221ENST00000561055 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
RABGGTA-221ENST00000561055 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-221ENST00000561055 POLD1P28340 1107 aa12.41□□□□□ -0.42
RABGGTA-221ENST00000561055 FKBP8Q14318 412 aa12.41□□□□□ -0.42
RABGGTA-221ENST00000561055 ZNF428Q96B54 188 aa12.41□□□□□ -0.42
RABGGTA-221ENST00000561055 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 ANXA1P04083 346 aa12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-221ENST00000561055 KIAA1551Q9HCM1 1747 aa12.4□□□□□ -0.43
RABGGTA-221ENST00000561055 ATP10DQ9P241 1426 aa12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 GIGYF2Q6Y7W6 1299 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 ARXQ96QS3 562 aa12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 ZNF652Q9Y2D9 606 aa12.39□□□□□ -0.43
RABGGTA-221ENST00000561055 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 MMP10P09238 476 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 NFIXQ14938 502 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 HLFQ16534 295 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 KIF6Q6ZMV9 814 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
RABGGTA-221ENST00000561055 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 DDR1Q08345 913 aa12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 TBC1D9BQ66K14 1250 aa12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 N4BP2Q86UW6 1770 aaPredicted RBP12.37□□□□□ -0.43
RABGGTA-221ENST00000561055 CARMIL3Q8ND23 1372 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 ZNF34Q8IZ26 560 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 ZBTB3Q9H5J0 574 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 CD2APQ9Y5K6 639 aa12.36□□□□□ -0.43
RABGGTA-221ENST00000561055 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 SERPINB2P05120 415 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 TCIRG1Q13488 830 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 LAMB2P55268 1798 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 MYH3P11055 1940 aa12.35□□□□□ -0.43
RABGGTA-221ENST00000561055 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 KSR2Q6VAB6 950 aa12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 G2E3Q7L622 706 aa12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
RABGGTA-221ENST00000561055 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 FLIIQ13045 1269 aa12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 SYT17Q9BSW7 474 aa12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-221ENST00000561055 ADCY9O60503 1353 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 TPTE2Q6XPS3 522 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 METTL22Q9BUU2 404 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 UBN2Q6ZU65 1347 aa12.32□□□□□ -0.44
RABGGTA-221ENST00000561055 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 TGFB2P61812 414 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 BICDL1Q6ZP65 573 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 PTPRCP08575 1304 aa12.31□□□□□ -0.44
RABGGTA-221ENST00000561055 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 SUSD4Q5VX71 490 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
RABGGTA-221ENST00000561055 KLRG2A4D1S0 409 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 NTSR2O95665 410 aa12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 GPTP24298 496 aa12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 FKBP5Q13451 457 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
RABGGTA-221ENST00000561055 CHD4Q14839 1912 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms