RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CAMKK2Q96RR4 588 aa9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
CTDSPL2-210ENST00000560834 HOXB7P09629 217 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 BAG6P46379 1132 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 ATN1P54259 1190 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 KCNQ4P56696 695 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 EXOSC9Q06265 439 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 EZH2Q15910 746 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 DNAJC10Q8IXB1 793 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 CCNL1Q9UK58 526 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 CASZ1Q86V15 1759 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
CTDSPL2-210ENST00000560834 SOS1Q07889 1333 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 TWISTNBQ3B726 338 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
CTDSPL2-210ENST00000560834 ANKRD36CQ5JPF3 1778 aa9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 CNTNAP4Q9C0A0 1308 aa9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 POTEFA5A3E0 1075 aa9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 SGIP1Q9BQI5 828 aa9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 USP16Q9Y5T5 823 aa9.09□□□□□ -0.95
CTDSPL2-210ENST00000560834 ELL2O00472 640 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 STK25O00506 426 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 VAMP4O75379 141 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 ZNF827Q17R98 1081 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 HDGFL1Q5TGJ6 251 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 ANO8Q9HCE9 1232 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 ZBTB1Q9Y2K1 713 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 COL24A1Q17RW2 1714 aa9.08□□□□□ -0.96
CTDSPL2-210ENST00000560834 ERBB4Q15303 1308 aa9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 GTPBP6O43824 516 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 PDIA6Q15084 440 aa9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 INTS5Q6P9B9 1019 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 LRP10Q7Z4F1 713 aa9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 AMIGO3Q86WK7 504 aa9.07□□□□□ -0.96
CTDSPL2-210ENST00000560834 NBPF26B4DH59 902 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 A1BGP04217 495 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 PROSER3Q2NL68 480 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 NBPF14Q5TI25 921 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 NBPF10Q6P3W6 841 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 NBPF15Q8N660 670 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 NECTIN2Q92692 538 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 TEX13AQ9BXU3 409 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 CCDC87Q9NVE4 849 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 COL15A1P39059 1388 aa9.06□□□□□ -0.96
CTDSPL2-210ENST00000560834 NUP98P52948 1817 aa9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 STARD3NLO95772 234 aa9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 ANXA1P04083 346 aa9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 RC3H1Q5TC82 1133 aaKnown RBP9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 SLAIN1Q8ND83 568 aa9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
CTDSPL2-210ENST00000560834 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 TCERG1O14776 1098 aaKnown RBP9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 RARSP54136 660 aaKnown RBP9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 ALDH1L2Q3SY69 923 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 CCDC30Q5VVM6 783 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 AK7Q96M32 723 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 BCL2L13Q9BXK5 485 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 PNPLA7Q6ZV29 1317 aa9.04□□□□□ -0.96
CTDSPL2-210ENST00000560834 GNPATO15228 680 aa9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 RPS6KA4O75676 772 aa9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 MYL6BP14649 208 aa9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 CANXP27824 592 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 IL6STP40189 918 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 SMIM5Q71RC9 77 aa9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 MRPL50Q8N5N7 158 aaKnown RBP9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-210ENST00000560834 NRXN2Q9P2S2 1712 aa9.02□□□□□ -0.96
CTDSPL2-210ENST00000560834 ADCY9O60503 1353 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 LAMB2P55268 1798 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 SOCS7O14512 581 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 SEC24BO95487 1268 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 PYGBP11216 843 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 SSFA2P28290 1259 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 SLC15A2Q16348 729 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 G2E3Q7L622 706 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 ZFP91Q96JP5 570 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 STK31Q9BXU1 1019 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 PHAXQ9H814 394 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms