RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 CHPF2Q9P2E5 772 aa14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 SRP68Q9UHB9 627 aaKnown RBP14.33□□□□□ -0.12
SNRPCP18-201ENST00000560619 MYL6BP14649 208 aa14.32□□□□□ -0.12
SNRPCP18-201ENST00000560619 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
SNRPCP18-201ENST00000560619 MMP10P09238 476 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 PROSER3Q2NL68 480 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 HSP90AB3PQ58FF7 597 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 GIGYF2Q6Y7W6 1299 aaKnown RBP14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 PLBD2Q8NHP8 589 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 NUP98P52948 1817 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
SNRPCP18-201ENST00000560619 NFIXQ14938 502 aa14.3□□□□□ -0.12
SNRPCP18-201ENST00000560619 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
SNRPCP18-201ENST00000560619 ANKRD13DQ6ZTN6 518 aa14.3□□□□□ -0.12
SNRPCP18-201ENST00000560619 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
SNRPCP18-201ENST00000560619 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
SNRPCP18-201ENST00000560619 NRXN2Q9P2S2 1712 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 DDX58O95786 925 aaKnown RBP14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 BRPF1P55201 1214 aaPredicted RBP14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 XAGE3Q8WTP9 111 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 NECTIN2Q92692 538 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 KIF13BQ9NQT8 1826 aa14.29□□□□□ -0.12
SNRPCP18-201ENST00000560619 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 TRIM28Q13263 835 aaKnown RBP14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 TBC1D9BQ66K14 1250 aa14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 ZNF34Q8IZ26 560 aa14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 IBTKQ9P2D0 1353 aaPredicted RBP14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
SNRPCP18-201ENST00000560619 RNF123Q5XPI4 1314 aa14.27□□□□□ -0.12
SNRPCP18-201ENST00000560619 ANXA1P04083 346 aa14.27□□□□□ -0.13
SNRPCP18-201ENST00000560619 SERPINB2P05120 415 aa14.27□□□□□ -0.13
SNRPCP18-201ENST00000560619 DDR1Q08345 913 aa14.27□□□□□ -0.13
SNRPCP18-201ENST00000560619 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
SNRPCP18-201ENST00000560619 HLFQ16534 295 aa14.27□□□□□ -0.13
SNRPCP18-201ENST00000560619 TGFB2P61812 414 aa14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 TPTE2Q6XPS3 522 aa14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 NYXQ9GZU5 481 aa14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 AFDNP55196 1824 aaKnown RBP14.26□□□□□ -0.13
SNRPCP18-201ENST00000560619 ANKRD36CQ5JPF3 1778 aa14.25□□□□□ -0.13
SNRPCP18-201ENST00000560619 FLIIQ13045 1269 aa14.25□□□□□ -0.13
SNRPCP18-201ENST00000560619 ZBTB3Q9H5J0 574 aa14.25□□□□□ -0.13
SNRPCP18-201ENST00000560619 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
SNRPCP18-201ENST00000560619 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
SNRPCP18-201ENST00000560619 RIC3Q7Z5B4 369 aa14.24□□□□□ -0.13
SNRPCP18-201ENST00000560619 ISCA1Q9BUE6 129 aa14.24□□□□□ -0.13
SNRPCP18-201ENST00000560619 FHDC1Q9C0D6 1143 aaPredicted RBP14.24□□□□□ -0.13
SNRPCP18-201ENST00000560619 PTPRCP08575 1304 aa14.23□□□□□ -0.13
SNRPCP18-201ENST00000560619 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
SNRPCP18-201ENST00000560619 BRIP1Q9BX63 1249 aa14.23□□□□□ -0.13
SNRPCP18-201ENST00000560619 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
SNRPCP18-201ENST00000560619 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 ST5P78524 1137 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
SNRPCP18-201ENST00000560619 KLRG2A4D1S0 409 aaPredicted RBP14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 PDE6BP35913 854 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 SLC10A5Q5PT55 438 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 G2E3Q7L622 706 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 SSH1Q8WYL5 1049 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 ARHGAP45Q92619 1136 aa14.21□□□□□ -0.13
SNRPCP18-201ENST00000560619 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 RARSP54136 660 aaKnown RBP14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 FKBP5Q13451 457 aaPredicted RBP14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 DNAAF4Q8WXU2 420 aa14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 MAP3K2Q9Y2U5 619 aa14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 ADCY9O60503 1353 aa14.2□□□□□ -0.14
SNRPCP18-201ENST00000560619 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
SNRPCP18-201ENST00000560619 NTSR2O95665 410 aa14.19□□□□□ -0.14
SNRPCP18-201ENST00000560619 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
SNRPCP18-201ENST00000560619 KIF16BQ96L93 1317 aa14.18□□□□□ -0.14
SNRPCP18-201ENST00000560619 GPTP24298 496 aa14.18□□□□□ -0.14
SNRPCP18-201ENST00000560619 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
SNRPCP18-201ENST00000560619 LINS1Q8NG48 757 aa14.18□□□□□ -0.14
SNRPCP18-201ENST00000560619 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
SNRPCP18-201ENST00000560619 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms