RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 RIPK4P57078 832 aa19.4■□□□□ 0.7
IDH3A-219ENST00000560414 TGFB2P61812 414 aa19.4■□□□□ 0.7
IDH3A-219ENST00000560414 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
IDH3A-219ENST00000560414 KIF13BQ9NQT8 1826 aa19.39■□□□□ 0.69
IDH3A-219ENST00000560414 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
IDH3A-219ENST00000560414 WDR43Q15061 677 aaKnown RBP eCLIP19.38■□□□□ 0.69
IDH3A-219ENST00000560414 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
IDH3A-219ENST00000560414 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
IDH3A-219ENST00000560414 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
IDH3A-219ENST00000560414 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
IDH3A-219ENST00000560414 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
IDH3A-219ENST00000560414 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
IDH3A-219ENST00000560414 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
IDH3A-219ENST00000560414 NPM2Q86SE8 214 aaKnown RBP19.36■□□□□ 0.69
IDH3A-219ENST00000560414 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
IDH3A-219ENST00000560414 SERPINB2P05120 415 aa19.35■□□□□ 0.69
IDH3A-219ENST00000560414 KCNA3P22001 575 aa19.35■□□□□ 0.69
IDH3A-219ENST00000560414 EIF4A1P60842 406 aaKnown RBP19.35■□□□□ 0.69
IDH3A-219ENST00000560414 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
IDH3A-219ENST00000560414 NBPF26B4DH59 902 aa19.34■□□□□ 0.69
IDH3A-219ENST00000560414 CAMTA2O94983 1202 aa19.34■□□□□ 0.69
IDH3A-219ENST00000560414 CHRNA5P30532 468 aa19.34■□□□□ 0.69
IDH3A-219ENST00000560414 NBPF10Q6P3W6 841 aaKnown RBP19.34■□□□□ 0.69
IDH3A-219ENST00000560414 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
IDH3A-219ENST00000560414 NBPF15Q8N660 670 aa19.34■□□□□ 0.69
IDH3A-219ENST00000560414 RUNDC1Q96C34 613 aa19.34■□□□□ 0.69
IDH3A-219ENST00000560414 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.68
IDH3A-219ENST00000560414 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.68
IDH3A-219ENST00000560414 KDM3BQ7LBC6 1761 aa19.32■□□□□ 0.68
IDH3A-219ENST00000560414 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
IDH3A-219ENST00000560414 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
IDH3A-219ENST00000560414 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
IDH3A-219ENST00000560414 PIM2Q9P1W9 311 aa19.31■□□□□ 0.68
IDH3A-219ENST00000560414 CCDC24Q8N4L8 307 aa19.3■□□□□ 0.68
IDH3A-219ENST00000560414 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
IDH3A-219ENST00000560414 CARMIL3Q8ND23 1372 aa19.3■□□□□ 0.68
IDH3A-219ENST00000560414 SCN7AQ01118 1682 aa19.3■□□□□ 0.68
IDH3A-219ENST00000560414 RGL2O15211 777 aa19.29■□□□□ 0.68
IDH3A-219ENST00000560414 CCDC184Q52MB2 194 aa19.29■□□□□ 0.68
IDH3A-219ENST00000560414 NGEFQ8N5V2 710 aa19.29■□□□□ 0.68
IDH3A-219ENST00000560414 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
IDH3A-219ENST00000560414 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
IDH3A-219ENST00000560414 SETDB2Q96T68 719 aa19.28■□□□□ 0.68
IDH3A-219ENST00000560414 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
IDH3A-219ENST00000560414 TSPYL2Q9H2G4 693 aaPredicted RBP19.27■□□□□ 0.68
IDH3A-219ENST00000560414 BRCA1P38398 1863 aaKnown RBP19.26■□□□□ 0.67
IDH3A-219ENST00000560414 PRR5LQ6MZQ0 368 aa19.26■□□□□ 0.67
IDH3A-219ENST00000560414 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
IDH3A-219ENST00000560414 LAMB4A4D0S4 1761 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 MYL6BP14649 208 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 HLFQ16534 295 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
IDH3A-219ENST00000560414 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
IDH3A-219ENST00000560414 APAF1O14727 1248 aa19.24■□□□□ 0.67
IDH3A-219ENST00000560414 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
IDH3A-219ENST00000560414 ZNF652Q9Y2D9 606 aa19.24■□□□□ 0.67
IDH3A-219ENST00000560414 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
IDH3A-219ENST00000560414 CHL1O00533 1208 aa19.23■□□□□ 0.67
IDH3A-219ENST00000560414 NPHP1O15259 732 aa19.23■□□□□ 0.67
IDH3A-219ENST00000560414 KRT24Q2M2I5 525 aa19.23■□□□□ 0.67
IDH3A-219ENST00000560414 TTLL7Q6ZT98 887 aa19.23■□□□□ 0.67
IDH3A-219ENST00000560414 CNBD1Q8NA66 436 aa19.23■□□□□ 0.67
IDH3A-219ENST00000560414 H0YIN7 160 aa19.22■□□□□ 0.67
IDH3A-219ENST00000560414 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
IDH3A-219ENST00000560414 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
IDH3A-219ENST00000560414 ADCY9O60503 1353 aa19.21■□□□□ 0.67
IDH3A-219ENST00000560414 FAM177BA6PVY3 158 aa19.21■□□□□ 0.67
IDH3A-219ENST00000560414 NBPF5PQ86XG9 351 aaPredicted RBP19.21■□□□□ 0.67
IDH3A-219ENST00000560414 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
IDH3A-219ENST00000560414 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
IDH3A-219ENST00000560414 ANXA1P04083 346 aa19.2■□□□□ 0.66
IDH3A-219ENST00000560414 PDE6BP35913 854 aa19.2■□□□□ 0.66
IDH3A-219ENST00000560414 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
IDH3A-219ENST00000560414 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.66
IDH3A-219ENST00000560414 ANKRD31Q8N7Z5 1873 aa19.2■□□□□ 0.66
IDH3A-219ENST00000560414 ARFGEF1Q9Y6D6 1849 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 ANP32CO43423 234 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 ST5P78524 1137 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 PDIA6Q15084 440 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 PROSER3Q2NL68 480 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 KIF6Q6ZMV9 814 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 ZBTB3Q9H5J0 574 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 MAP3K15Q6ZN16 1313 aa19.19■□□□□ 0.66
IDH3A-219ENST00000560414 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
IDH3A-219ENST00000560414 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
IDH3A-219ENST00000560414 PYGBP11216 843 aa19.17■□□□□ 0.66
IDH3A-219ENST00000560414 CHRM1P11229 460 aaPredicted RBP19.17■□□□□ 0.66
IDH3A-219ENST00000560414 C9orf131Q5VYM1 1079 aa19.17■□□□□ 0.66
IDH3A-219ENST00000560414 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
IDH3A-219ENST00000560414 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
IDH3A-219ENST00000560414 GPBP1L1Q9HC44 474 aaPredicted RBP19.17■□□□□ 0.66
IDH3A-219ENST00000560414 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
IDH3A-219ENST00000560414 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
IDH3A-219ENST00000560414 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
IDH3A-219ENST00000560414 GPTP24298 496 aa19.15■□□□□ 0.66
IDH3A-219ENST00000560414 RASSF7Q02833 373 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms