RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PLA2G4AP47712 749 aa22.73■■□□□ 1.23
SEMA4B-215ENST00000560089 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
SEMA4B-215ENST00000560089 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 GPS2Q13227 327 aa22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 SRLQ86TD4 932 aa22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 PNMA6AP0CW24 399 aaPredicted RBP22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 ZSCAN25Q6NSZ9 544 aa22.72■■□□□ 1.23
SEMA4B-215ENST00000560089 RRP15Q9Y3B9 282 aaKnown RBP22.71■■□□□ 1.23
SEMA4B-215ENST00000560089 SLU7O95391 586 aaKnown RBP22.71■■□□□ 1.23
SEMA4B-215ENST00000560089 SMARCE1Q969G3 411 aa22.71■■□□□ 1.23
SEMA4B-215ENST00000560089 RAD50Q92878 1312 aa22.71■■□□□ 1.23
SEMA4B-215ENST00000560089 CPSF1Q10570 1443 aaKnown RBP22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 ST5P78524 1137 aa22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 H2AFXP16104 143 aaPredicted RBP22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 TTC31Q49AM3 519 aaPredicted RBP22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 NRBP1Q9UHY1 535 aa22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
SEMA4B-215ENST00000560089 RGPD8O14715 1765 aaPredicted RBP22.69■■□□□ 1.22
SEMA4B-215ENST00000560089 NEK4P51957 841 aa22.69■■□□□ 1.22
SEMA4B-215ENST00000560089 IPO8O15397 1037 aaKnown RBP22.69■■□□□ 1.22
SEMA4B-215ENST00000560089 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
SEMA4B-215ENST00000560089 NOM1Q5C9Z4 860 aaKnown RBP22.69■■□□□ 1.22
SEMA4B-215ENST00000560089 TMEM87AQ8NBN3 555 aa22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 DEF6Q9H4E7 631 aa22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 ERBB3P21860 1342 aa22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 PTPN14Q15678 1187 aa22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 NGDNQ8NEJ9 315 aaKnown RBP22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
SEMA4B-215ENST00000560089 CLCN6P51797 869 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 UBE2HP62256 183 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 CASC1Q6TDU7 716 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 CHD2O14647 1828 aaKnown RBP22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 NSD2O96028 1365 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 PIK3R4Q99570 1358 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 CCDC171Q6TFL3 1326 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
SEMA4B-215ENST00000560089 ADGRB2O60241 1585 aa22.66■■□□□ 1.22
SEMA4B-215ENST00000560089 ATP2B1P20020 1258 aa22.66■■□□□ 1.22
SEMA4B-215ENST00000560089 CDC42BPGQ6DT37 1551 aa22.66■■□□□ 1.22
SEMA4B-215ENST00000560089 CUL4AQ13619 759 aa22.66■■□□□ 1.22
SEMA4B-215ENST00000560089 MCM2P49736 904 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 TSGA10IPQ3SY00 556 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 TTC22Q5TAA0 569 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 NOL8Q76FK4 1167 aaKnown RBP22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 PLEKHM2Q8IWE5 1019 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 EXOC6BQ9Y2D4 811 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 TCHHQ07283 1943 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 CCDC192P0DO97 292 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 FBXO18Q8NFZ0 1043 aa22.65■■□□□ 1.22
SEMA4B-215ENST00000560089 RRS1Q15050 365 aaKnown RBP22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 ERCC6LQ2NKX8 1250 aa22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 NUTM2GQ5VZR2 741 aa22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 PACS2Q86VP3 889 aa22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 PROSER2Q86WR7 435 aaPredicted RBP22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 GOLGA5Q8TBA6 731 aa22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 EDC4Q6P2E9 1401 aaKnown RBP22.64■■□□□ 1.22
SEMA4B-215ENST00000560089 INTS4Q96HW7 963 aaKnown RBP22.64■■□□□ 1.21
SEMA4B-215ENST00000560089 SHPRHQ149N8 1683 aa22.64■■□□□ 1.21
SEMA4B-215ENST00000560089 DONSONQ9NYP3 566 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 FAM200AQ8TCP9 573 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 CACTINQ8WUQ7 758 aaKnown RBP22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 PLEKHG3A1L390 1219 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 CFAP53Q96M91 514 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 CXorf56Q9H5V9 222 aa22.63■■□□□ 1.21
SEMA4B-215ENST00000560089 USP27XA6NNY8 438 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 CCDC91Q7Z6B0 441 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 TRIM5Q9C035 493 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 SRCIN1Q9C0H9 1055 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 TTC21BQ7Z4L5 1316 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
SEMA4B-215ENST00000560089 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 COG3Q96JB2 828 aa22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 NALCNQ8IZF0 1738 aa22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 SATB1Q01826 763 aa22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 TMCO3Q6UWJ1 677 aa22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 NYAP1Q6ZVC0 841 aa22.61■■□□□ 1.21
SEMA4B-215ENST00000560089 ITSN1Q15811 1721 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 LUZP1Q86V48 1076 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 EGFL6Q8IUX8 553 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 MAGEA9P43362 315 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 E2F4Q16254 413 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 AK7Q96M32 723 aa22.6■■□□□ 1.21
SEMA4B-215ENST00000560089 ESCO1Q5FWF5 840 aa22.59■■□□□ 1.21
SEMA4B-215ENST00000560089 ZNF75DP51815 510 aa22.59■■□□□ 1.21
SEMA4B-215ENST00000560089 RPAP1Q9BWH6 1393 aaPredicted RBP22.59■■□□□ 1.21
SEMA4B-215ENST00000560089 FIBPO43427 364 aa22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 ZCCHC17Q9NP64 241 aaKnown RBP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 ARGLU1Q9NWB6 273 aaPredicted RBP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 ZRANB2O95218 330 aaKnown RBP eCLIP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 OAS2P29728 719 aaKnown RBP22.58■■□□□ 1.21
SEMA4B-215ENST00000560089 USP6P35125 1406 aa22.58■■□□□ 1.2
SEMA4B-215ENST00000560089 SIRT2Q8IXJ6 389 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms