RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 PROSER3Q2NL68 480 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 CLASRPQ8N2M8 674 aaKnown RBP9.85□□□□□ -0.83
SMAD3-212ENST00000559937 RILPL2Q969X0 211 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 TJP1Q07157 1748 aa9.85□□□□□ -0.83
SMAD3-212ENST00000559937 FSD2A1L4K1 749 aa9.84□□□□□ -0.83
SMAD3-212ENST00000559937 SNRPA1P09661 255 aaKnown RBP9.84□□□□□ -0.83
SMAD3-212ENST00000559937 OS9Q13438 667 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-212ENST00000559937 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
SMAD3-212ENST00000559937 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
SMAD3-212ENST00000559937 IL1RAPL2Q9NP60 686 aa9.84□□□□□ -0.83
SMAD3-212ENST00000559937 SOS2Q07890 1332 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-212ENST00000559937 WDR17Q8IZU2 1322 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 SGSM2O43147 1006 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 CUL4AQ13619 759 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 RIC3Q7Z5B4 369 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 NUTM1Q86Y26 1132 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 TTC5Q8N0Z6 440 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 INTS4Q96HW7 963 aaKnown RBP9.83□□□□□ -0.84
SMAD3-212ENST00000559937 METTL22Q9BUU2 404 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-212ENST00000559937 ANO2Q9NQ90 1003 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 WNK3Q9BYP7 1800 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 COL5A2P05997 1499 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-212ENST00000559937 PLCH1Q4KWH8 1693 aa9.83□□□□□ -0.84
SMAD3-212ENST00000559937 RAD50Q92878 1312 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 KCPQ6ZWJ8 1503 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 HIP1O00291 1037 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 CYP27B1O15528 508 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 SSFA2P28290 1259 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 HSPA4P34932 840 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 TSHZ3Q63HK5 1081 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 BRINP3Q76B58 766 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 LRP10Q7Z4F1 713 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 SUCLG2Q96I99 432 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 ECHDC1Q9NTX5 307 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 ROBO1Q9Y6N7 1651 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
SMAD3-212ENST00000559937 PRAMEF22A3QJZ6 481 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 ERVV-2B6SEH9 535 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 IGKV5-2P06315 115 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 NEK4P51957 841 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 G3BP1Q13283 466 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 SLC39A6Q13433 755 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 GCKRQ14397 625 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 CWF19L2Q2TBE0 894 aaKnown RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 DDX17Q92841 729 aaKnown RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 RGS17Q9UGC6 210 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-212ENST00000559937 ITGB4P16144 1822 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 SPEF2Q9C093 1822 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 TNS2Q63HR2 1409 aa9.81□□□□□ -0.84
SMAD3-212ENST00000559937 RFX7Q2KHR2 1363 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 IFIT2P09913 472 aaKnown RBP9.8□□□□□ -0.84
SMAD3-212ENST00000559937 MRE11P49959 708 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 CABP4P57796 275 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 ANKRD13DQ6ZTN6 518 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 KIAA1211Q6ZU35 1233 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 COPS6Q7L5N1 327 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 CABLES1Q8TDN4 633 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 EVI5LQ96CN4 794 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 KAZALD1Q96I82 304 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 TMX3Q96JJ7 454 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 LSG1Q9H089 658 aaKnown RBP9.8□□□□□ -0.84
SMAD3-212ENST00000559937 BICC1Q9H694 974 aaKnown RBP9.8□□□□□ -0.84
SMAD3-212ENST00000559937 SNRKQ9NRH2 765 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 FOXD4L1Q9NU39 408 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 LRP6O75581 1613 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 COL14A1Q05707 1796 aaKnown RBP9.8□□□□□ -0.84
SMAD3-212ENST00000559937 ANKRD36CQ5JPF3 1778 aa9.8□□□□□ -0.84
SMAD3-212ENST00000559937 COL22A1Q8NFW1 1626 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-212ENST00000559937 AIMP1Q12904 312 aaKnown RBP9.79□□□□□ -0.84
SMAD3-212ENST00000559937 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 RABL6Q3YEC7 729 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-212ENST00000559937 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 ZCRB1Q8TBF4 217 aaKnown RBP9.79□□□□□ -0.84
SMAD3-212ENST00000559937 KCNB2Q92953 911 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 CARD10Q9BWT7 1032 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 COPRSQ9NQ92 184 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 PRDM11Q9NQV5 511 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 DIAPH3Q9NSV4 1193 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
SMAD3-212ENST00000559937 JCADQ9P266 1359 aa9.78□□□□□ -0.84
SMAD3-212ENST00000559937 SASH1O94885 1247 aa9.78□□□□□ -0.84
SMAD3-212ENST00000559937 MYL6BP14649 208 aa9.78□□□□□ -0.84
SMAD3-212ENST00000559937 MYD88Q99836 296 aa9.78□□□□□ -0.84
SMAD3-212ENST00000559937 TM6SF1Q9BZW5 370 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms