RNA–Protein interactions for RNA: ENST00000559848.1

WDR61-209, Transcript of WD repeat domain 61, human

TSL 3

Gene WDR61, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR61-209	ENST00000559848	ZNF521	Q96K83	1311 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	NFIX	Q14938	502 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	TWISTNB	Q3B726	338 aa	Predicted RBP	12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	KIF6	Q6ZMV9	814 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	CCDC24	Q8N4L8	307 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	MYH16	Q9H6N6	1097 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	WWC3	Q9ULE0	1092 aa		12.4	□□□□□ -0.42
WDR61-209	ENST00000559848	COPS6	Q7L5N1	327 aa		12.39	□□□□□ -0.43
WDR61-209	ENST00000559848	NLGN2	Q8NFZ4	835 aa		12.39	□□□□□ -0.43
WDR61-209	ENST00000559848	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
WDR61-209	ENST00000559848	POLRMT	O00411	1230 aa	Known RBP	12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	HOXB7	P09629	217 aa		12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	GPT	P24298	496 aa		12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	TM4SF1	P30408	202 aa		12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	SYT17	Q9BSW7	474 aa		12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	PHAX	Q9H814	394 aa	Known RBP	12.38	□□□□□ -0.43
WDR61-209	ENST00000559848	ERBB4	Q15303	1308 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848		E9PSI1	815 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	SLFN5	Q08AF3	891 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	CCDC30	Q5VVM6	783 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	LRP10	Q7Z4F1	713 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	PELP1	Q8IZL8	1130 aa	Known RBP	12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	DBF4	Q9UBU7	674 aa	Predicted RBP	12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	MAP3K15	Q6ZN16	1313 aa		12.37	□□□□□ -0.43
WDR61-209	ENST00000559848	NPHP1	O15259	732 aa		12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	VAMP4	O75379	141 aa		12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	SERPINB2	P05120	415 aa		12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	SETDB2	Q96T68	719 aa		12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	ZNF652	Q9Y2D9	606 aa		12.36	□□□□□ -0.43
WDR61-209	ENST00000559848	G2E3	Q7L622	706 aa		12.35	□□□□□ -0.43
WDR61-209	ENST00000559848	STK31	Q9BXU1	1019 aa		12.35	□□□□□ -0.43
WDR61-209	ENST00000559848	HYPK	Q9NX55	129 aa		12.35	□□□□□ -0.43
WDR61-209	ENST00000559848	SCN7A	Q01118	1682 aa		12.35	□□□□□ -0.43
WDR61-209	ENST00000559848	SLC4A2	P04920	1241 aa		12.34	□□□□□ -0.43
WDR61-209	ENST00000559848	COL24A1	Q17RW2	1714 aa		12.34	□□□□□ -0.43
WDR61-209	ENST00000559848		A0A0G2JLW4	131 aa		12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	ERVV-1	B6SEH8	477 aa		12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	ATP5J2-PTCD1	G3V325	749 aa		12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	ANKRD13D	Q6ZTN6	518 aa		12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	RIC3	Q7Z5B4	369 aa		12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	YTHDC1	Q96MU7	727 aa	Known RBP	12.33	□□□□□ -0.44
WDR61-209	ENST00000559848	CARMIL3	Q8ND23	1372 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	DPEP1	P16444	411 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	CHRNA5	P30532	468 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	PRR5L	Q6MZQ0	368 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	CLEC4G	Q6UXB4	293 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	NUTM1	Q86Y26	1132 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	CNBD1	Q8NA66	436 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	BCL2L13	Q9BXK5	485 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	CD2AP	Q9Y5K6	639 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	BCOR	Q6W2J9	1755 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	UBN2	Q6ZU65	1347 aa		12.32	□□□□□ -0.44
WDR61-209	ENST00000559848	GTF2E1	P29083	439 aa	Predicted RBP	12.31	□□□□□ -0.44
WDR61-209	ENST00000559848	SUSD4	Q5VX71	490 aa		12.31	□□□□□ -0.44
WDR61-209	ENST00000559848	PLBD2	Q8NHP8	589 aa		12.31	□□□□□ -0.44
WDR61-209	ENST00000559848	MYD88	Q99836	296 aa		12.31	□□□□□ -0.44
WDR61-209	ENST00000559848	RNF216	Q9NWF9	866 aa	Predicted RBP	12.31	□□□□□ -0.44
WDR61-209	ENST00000559848	C10orf71	Q711Q0	1435 aa		12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	ST5	P78524	1137 aa		12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	GPR162	Q16538	588 aa		12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	RTL5	Q5HYW3	569 aa	Predicted RBP	12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	ZNF34	Q8IZ26	560 aa		12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	TRMT2A	Q8IZ69	625 aa	Known RBP	12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	CHMP4A	Q9BY43	222 aa		12.3	□□□□□ -0.44
WDR61-209	ENST00000559848	GOLGB1	Q14789	3259 aa	Known RBP	12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	PI4KAP2	A4QPH2	592 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	DDX58	O95786	925 aa	Known RBP	12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	FLII	Q13045	1269 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	FKBP5	Q13451	457 aa	Predicted RBP	12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	TCIRG1	Q13488	830 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	ERFE	Q4G0M1	354 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	C2CD5	Q86YS7	1000 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	SYNE4	Q8N205	404 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	PI4KAP1	Q8N8J0	262 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	JARID2	Q92833	1246 aa	Predicted RBP	12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	MAP3K2	Q9Y2U5	619 aa		12.29	□□□□□ -0.44
WDR61-209	ENST00000559848	AFDN	P55196	1824 aa	Known RBP	12.28	□□□□□ -0.44
WDR61-209	ENST00000559848		F6X3S4	739 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	HSP90AB3P	Q58FF7	597 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	TPTE2	Q6XPS3	522 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	NLRP10	Q86W26	655 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	SSH1	Q8WYL5	1049 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	TRMT112	Q9UI30	125 aa	Known RBP	12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	ZBED9	Q6R2W3	1325 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	ATP10D	Q9P241	1426 aa		12.28	□□□□□ -0.44
WDR61-209	ENST00000559848	PXDNL	A1KZ92	1463 aa		12.27	□□□□□ -0.44
WDR61-209	ENST00000559848	NTSR2	O95665	410 aa		12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	YBX3	P16989	372 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	TGFB2	P61812	414 aa		12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	KSR2	Q6VAB6	950 aa		12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	MRPL50	Q8N5N7	158 aa	Known RBP	12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	UTP14A	Q9BVJ6	771 aa	Known RBP	12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	NYX	Q9GZU5	481 aa		12.27	□□□□□ -0.45
WDR61-209	ENST00000559848	SMC4	Q9NTJ3	1288 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms