RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 C4BP0C0L5 1744 aa22.22■■□□□ 1.15
SNX1-208ENST00000559844 RPAP2Q8IXW5 612 aaPredicted RBP22.21■■□□□ 1.15
SNX1-208ENST00000559844 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
SNX1-208ENST00000559844 G2E3Q7L622 706 aa22.21■■□□□ 1.15
SNX1-208ENST00000559844 NUP188Q5SRE5 1749 aa22.21■■□□□ 1.15
SNX1-208ENST00000559844 SIRT2Q8IXJ6 389 aa22.2■■□□□ 1.14
SNX1-208ENST00000559844 FLIIQ13045 1269 aa22.19■■□□□ 1.14
SNX1-208ENST00000559844 CRKLP46109 303 aaKnown RBP22.18■■□□□ 1.14
SNX1-208ENST00000559844 ANKRD44Q8N8A2 993 aa22.18■■□□□ 1.14
SNX1-208ENST00000559844 A1BGP04217 495 aa22.18■■□□□ 1.14
SNX1-208ENST00000559844 PIP4K2AP48426 406 aaPredicted RBP22.18■■□□□ 1.14
SNX1-208ENST00000559844 PXDNLA1KZ92 1463 aa22.17■■□□□ 1.14
SNX1-208ENST00000559844 ANKRD45Q5TZF3 282 aa22.17■■□□□ 1.14
SNX1-208ENST00000559844 ATP10DQ9P241 1426 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 FKBP5Q13451 457 aaPredicted RBP22.16■■□□□ 1.14
SNX1-208ENST00000559844 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 UPF2Q9HAU5 1272 aaKnown RBP22.16■■□□□ 1.14
SNX1-208ENST00000559844 CCDC87Q9NVE4 849 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 CNTNAP4Q9C0A0 1308 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 ZBTB1Q9Y2K1 713 aa22.16■■□□□ 1.14
SNX1-208ENST00000559844 INTS5Q6P9B9 1019 aaKnown RBP22.15■■□□□ 1.14
SNX1-208ENST00000559844 DCTPP1Q9H773 170 aa22.15■■□□□ 1.14
SNX1-208ENST00000559844 UBR3Q6ZT12 1888 aa22.15■■□□□ 1.14
SNX1-208ENST00000559844 NBPF26B4DH59 902 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 ANXA1P04083 346 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 MYL6BP14649 208 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 HMGB2P26583 209 aaKnown RBP22.14■■□□□ 1.14
SNX1-208ENST00000559844 NBPF14Q5TI25 921 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 CEP85Q6P2H3 762 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 NBPF10Q6P3W6 841 aaKnown RBP22.14■■□□□ 1.14
SNX1-208ENST00000559844 NBPF15Q8N660 670 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 MEIS3Q99687 375 aa22.14■■□□□ 1.14
SNX1-208ENST00000559844 DBF4Q9UBU7 674 aaPredicted RBP22.14■■□□□ 1.14
SNX1-208ENST00000559844 N4BP2Q86UW6 1770 aaPredicted RBP22.14■■□□□ 1.14
SNX1-208ENST00000559844 ERBB4Q15303 1308 aa22.14■■□□□ 1.13
SNX1-208ENST00000559844 F6X3S4 739 aa22.14■■□□□ 1.13
SNX1-208ENST00000559844 PROSER3Q2NL68 480 aa22.14■■□□□ 1.13
SNX1-208ENST00000559844 AK7Q96M32 723 aa22.14■■□□□ 1.13
SNX1-208ENST00000559844 PDIA6Q15084 440 aa22.13■■□□□ 1.13
SNX1-208ENST00000559844 RC3H1Q5TC82 1133 aaKnown RBP22.13■■□□□ 1.13
SNX1-208ENST00000559844 ZNF330Q9Y3S2 320 aaPredicted RBP22.13■■□□□ 1.13
SNX1-208ENST00000559844 TUBGCP6Q96RT7 1819 aa22.13■■□□□ 1.13
SNX1-208ENST00000559844 GNPATO15228 680 aa22.12■■□□□ 1.13
SNX1-208ENST00000559844 HMMRO75330 724 aa22.12■■□□□ 1.13
SNX1-208ENST00000559844 DDX21Q9NR30 783 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX1-208ENST00000559844 GNAI3P08754 354 aa22.12■■□□□ 1.13
SNX1-208ENST00000559844 SEC24BO95487 1268 aa22.1■■□□□ 1.13
SNX1-208ENST00000559844 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
SNX1-208ENST00000559844 GNAI2P04899 355 aa22.09■■□□□ 1.13
SNX1-208ENST00000559844 IL6STP40189 918 aaPredicted RBP22.09■■□□□ 1.13
SNX1-208ENST00000559844 AKT1S1Q96B36 256 aa22.09■■□□□ 1.13
SNX1-208ENST00000559844 ANO8Q9HCE9 1232 aaPredicted RBP22.09■■□□□ 1.13
SNX1-208ENST00000559844 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
SNX1-208ENST00000559844 DAXXQ9UER7 740 aaPredicted RBP22.09■■□□□ 1.13
SNX1-208ENST00000559844 BMP2KLQ5H9B9 411 aa22.08■■□□□ 1.13
SNX1-208ENST00000559844 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
SNX1-208ENST00000559844 RPS6KA4O75676 772 aa22.08■■□□□ 1.12
SNX1-208ENST00000559844 SMIM5Q71RC9 77 aa22.08■■□□□ 1.12
SNX1-208ENST00000559844 LRP10Q7Z4F1 713 aa22.08■■□□□ 1.12
SNX1-208ENST00000559844 AMIGO3Q86WK7 504 aa22.08■■□□□ 1.12
SNX1-208ENST00000559844 PHAXQ9H814 394 aaKnown RBP22.08■■□□□ 1.12
SNX1-208ENST00000559844 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.12
SNX1-208ENST00000559844 PHF14O94880 888 aa22.07■■□□□ 1.12
SNX1-208ENST00000559844 EIF5P55010 431 aaKnown RBP22.07■■□□□ 1.12
SNX1-208ENST00000559844 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
SNX1-208ENST00000559844 COL15A1P39059 1388 aa22.07■■□□□ 1.12
SNX1-208ENST00000559844 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
SNX1-208ENST00000559844 AIMP1Q12904 312 aaKnown RBP22.06■■□□□ 1.12
SNX1-208ENST00000559844 SLC15A2Q16348 729 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 XAGE3Q8WTP9 111 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 ARXQ96QS3 562 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 QSER1Q2KHR3 1735 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 COPS6Q7L5N1 327 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 TBC1D32Q96NH3 1257 aa22.05■■□□□ 1.12
SNX1-208ENST00000559844 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.04■■□□□ 1.12
SNX1-208ENST00000559844 SSFA2P28290 1259 aa22.03■■□□□ 1.12
SNX1-208ENST00000559844 TRAPPC3LQ5T215 181 aa22.03■■□□□ 1.12
SNX1-208ENST00000559844 TTLL7Q6ZT98 887 aa22.02■■□□□ 1.12
SNX1-208ENST00000559844 DZIP3Q86Y13 1208 aaKnown RBP22.02■■□□□ 1.12
SNX1-208ENST00000559844 SRCIN1Q9C0H9 1055 aa22.02■■□□□ 1.12
SNX1-208ENST00000559844 TBC1D2BQ9UPU7 963 aa22.02■■□□□ 1.12
SNX1-208ENST00000559844 A0A087WZG4 1122 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 ADRA2BP18089 450 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 ARHGEF1Q92888 912 aaKnown RBP22.01■■□□□ 1.11
SNX1-208ENST00000559844 BCORQ6W2J9 1755 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 ARFGEF2Q9Y6D5 1785 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 KIF6Q6ZMV9 814 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
SNX1-208ENST00000559844 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
SNX1-208ENST00000559844 SOCS7O14512 581 aa22■■□□□ 1.11
SNX1-208ENST00000559844 EIF5BO60841 1220 aaKnown RBP22■■□□□ 1.11
SNX1-208ENST00000559844 ATP8B2P98198 1209 aa22■■□□□ 1.11
SNX1-208ENST00000559844 NUP98P52948 1817 aa22■■□□□ 1.11
SNX1-208ENST00000559844 SCN7AQ01118 1682 aa22■■□□□ 1.11
SNX1-208ENST00000559844 UBTFL1P0CB47 393 aaPredicted RBP21.99■■□□□ 1.11
SNX1-208ENST00000559844 RFC4P35249 363 aa21.99■■□□□ 1.11
SNX1-208ENST00000559844 PLEKHM2Q8IWE5 1019 aa21.99■■□□□ 1.11
SNX1-208ENST00000559844 DDX58O95786 925 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms