RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 ZIC5Q96T25 663 aa8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 LRRC4BQ9NT99 713 aa8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 SERPINA10Q9UK55 444 aa8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 GJA3Q9Y6H8 435 aa8.49□□□□□ -1.05
CTDSPL2-207ENST00000559738 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
CTDSPL2-207ENST00000559738 PSMA6P60900 246 aaKnown RBP8.48□□□□□ -1.05
CTDSPL2-207ENST00000559738 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
CTDSPL2-207ENST00000559738 HINFPQ9BQA5 517 aa8.48□□□□□ -1.05
CTDSPL2-207ENST00000559738 GDF2Q9UK05 429 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL2-207ENST00000559738 SHISA8B8ZZ34 492 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 KHNYNO15037 678 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 C1orf229Q6ZS94 237 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 GOLGA6L1Q8N7Z2 621 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 HCN2Q9UL51 889 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 ZMIZ1Q9ULJ6 1067 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 NOVA2Q9UNW9 492 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 CNTNAP5Q8WYK1 1306 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
CTDSPL2-207ENST00000559738 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 MAPTP10636 758 aaKnown RBP8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 CD33P20138 364 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 KANK3Q6NY19 840 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 PODNQ7Z5L7 613 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 GALNT6Q8NCL4 622 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 FAM200AQ8TCP9 573 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 C2orf49Q9BVC5 232 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
CTDSPL2-207ENST00000559738 FAM157BP0CG42 384 aa8.45□□□□□ -1.06
CTDSPL2-207ENST00000559738 TNP2Q05952 138 aa8.45□□□□□ -1.06
CTDSPL2-207ENST00000559738 STK32AQ8WU08 396 aa8.45□□□□□ -1.06
CTDSPL2-207ENST00000559738 GGA1Q9UJY5 639 aa8.45□□□□□ -1.06
CTDSPL2-207ENST00000559738 PHF20L1A8MW92 1017 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 ATG7O95352 703 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 ELOAQ14241 798 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 SLCO4C1Q6ZQN7 724 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 CHMP7Q8WUX9 453 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 EDARADDQ8WWZ3 215 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 PBXIP1Q96AQ6 731 aa8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 DNMT3AQ9Y6K1 912 aaPredicted RBP8.44□□□□□ -1.06
CTDSPL2-207ENST00000559738 ARAFP10398 606 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 IGFBP4P22692 258 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 WEE1P30291 646 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 SNRPNP63162 240 aaKnown RBP8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 FAM69CQ0P6D2 419 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 RHPN1Q8TCX5 695 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
CTDSPL2-207ENST00000559738 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
CTDSPL2-207ENST00000559738 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
CTDSPL2-207ENST00000559738 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 NEURL1BA8MQ27 555 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 AMPD1P23109 780 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 ALDH16A1Q8IZ83 802 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
CTDSPL2-207ENST00000559738 EFSO43281 561 aa8.4□□□□□ -1.06
CTDSPL2-207ENST00000559738 EPXP11678 715 aa8.4□□□□□ -1.06
CTDSPL2-207ENST00000559738 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
CTDSPL2-207ENST00000559738 MARK1Q9P0L2 795 aa8.4□□□□□ -1.06
CTDSPL2-207ENST00000559738 GPC6Q9Y625 555 aaPredicted RBP8.4□□□□□ -1.06
CTDSPL2-207ENST00000559738 ADH6P28332 368 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 GPAT2Q6NUI2 795 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 NGLY1Q96IV0 654 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 HSH2DQ96JZ2 352 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
CTDSPL2-207ENST00000559738 PCBP4P57723 403 aaKnown RBP8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 OCLNQ16625 522 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 ZNF468Q5VIY5 522 aaPredicted RBP8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 MKL2Q9ULH7 1088 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 PRR12Q9ULL5 1215 aa8.38□□□□□ -1.07
CTDSPL2-207ENST00000559738 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 PRMT3O60678 531 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 SLAIN2Q9P270 581 aa8.37□□□□□ -1.07
CTDSPL2-207ENST00000559738 FOXO3O43524 673 aa8.36□□□□□ -1.07
CTDSPL2-207ENST00000559738 HOXB4P17483 251 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-207ENST00000559738 FKBP5Q13451 457 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-207ENST00000559738 GRIN2CQ14957 1233 aa8.36□□□□□ -1.07
CTDSPL2-207ENST00000559738 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
CTDSPL2-207ENST00000559738 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-207ENST00000559738 RTN1Q16799 776 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms