RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 XAGE3Q8WTP9 111 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 LTBP4Q8N2S1 1624 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
CLPX-204ENST00000559152 MYL6BP14649 208 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 IL2RBP14784 551 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
CLPX-204ENST00000559152 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
CLPX-204ENST00000559152 RAB3GAP1Q15042 981 aa13.75□□□□□ -0.21
CLPX-204ENST00000559152 CWC22Q9HCG8 908 aaKnown RBP13.75□□□□□ -0.21
CLPX-204ENST00000559152 NEURL1BA8MQ27 555 aa13.75□□□□□ -0.21
CLPX-204ENST00000559152 G3BP1Q13283 466 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■■□□□ 13.8
CLPX-204ENST00000559152 GCKRQ14397 625 aa13.75□□□□□ -0.21
CLPX-204ENST00000559152 IGKV5-2P06315 115 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 EVA1CP58658 441 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 IL17RAQ96F46 866 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 USP16Q9Y5T5 823 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 C5P01031 1676 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
CLPX-204ENST00000559152 COL15A1P39059 1388 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 MYD88Q99836 296 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
CLPX-204ENST00000559152 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
CLPX-204ENST00000559152 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
CLPX-204ENST00000559152 NUCB2P80303 420 aa13.72□□□□□ -0.21
CLPX-204ENST00000559152 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
CLPX-204ENST00000559152 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
CLPX-204ENST00000559152 UNC5CLQ8IV45 518 aa13.72□□□□□ -0.21
CLPX-204ENST00000559152 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
CLPX-204ENST00000559152 KAZALD1Q96I82 304 aa13.72□□□□□ -0.21
CLPX-204ENST00000559152 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.22
CLPX-204ENST00000559152 GOLGA6L22H0YM25 854 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 HIP1O00291 1037 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 SKOR2Q2VWA4 1001 aaPredicted RBP13.7□□□□□ -0.22
CLPX-204ENST00000559152 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 SGSM2O43147 1006 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 NEK4P51957 841 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 AACSQ86V21 672 aa13.7□□□□□ -0.22
CLPX-204ENST00000559152 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
CLPX-204ENST00000559152 LAMB4A4D0S4 1761 aa13.69□□□□□ -0.22
CLPX-204ENST00000559152 NHSL1Q5SYE7 1610 aa13.69□□□□□ -0.22
CLPX-204ENST00000559152 TRAK2O60296 914 aa13.69□□□□□ -0.22
CLPX-204ENST00000559152 HSPA4P34932 840 aa13.69□□□□□ -0.22
CLPX-204ENST00000559152 COPRSQ9NQ92 184 aa13.69□□□□□ -0.22
CLPX-204ENST00000559152 STRN4Q9NRL3 753 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 FOXD4L1Q9NU39 408 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 ABCA3Q99758 1704 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 SASH1O94885 1247 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
CLPX-204ENST00000559152 RAD50Q92878 1312 aa13.68□□□□□ -0.22
CLPX-204ENST00000559152 MAP4K4O95819 1239 aaPredicted RBP13.67□□□□□ -0.22
CLPX-204ENST00000559152 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
CLPX-204ENST00000559152 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
CLPX-204ENST00000559152 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
CLPX-204ENST00000559152 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
CLPX-204ENST00000559152 A0A087WZG4 1122 aa13.67□□□□□ -0.22
CLPX-204ENST00000559152 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
CLPX-204ENST00000559152 TNS2Q63HR2 1409 aa13.66□□□□□ -0.22
CLPX-204ENST00000559152 GLI3P10071 1580 aa13.66□□□□□ -0.22
CLPX-204ENST00000559152 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
CLPX-204ENST00000559152 INTS4Q96HW7 963 aaKnown RBP13.66□□□□□ -0.22
CLPX-204ENST00000559152 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
CLPX-204ENST00000559152 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 NBPF14Q5TI25 921 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
CLPX-204ENST00000559152 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
CLPX-204ENST00000559152 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 LSG1Q9H089 658 aaKnown RBP13.65□□□□□ -0.22
CLPX-204ENST00000559152 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
CLPX-204ENST00000559152 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 PAPPAQ13219 1627 aa13.65□□□□□ -0.22
CLPX-204ENST00000559152 H7C1W4 665 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 TMX3Q96JJ7 454 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
CLPX-204ENST00000559152 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
CLPX-204ENST00000559152 CUL4AQ13619 759 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 SIL1Q9H173 461 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
CLPX-204ENST00000559152 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
CLPX-204ENST00000559152 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
CLPX-204ENST00000559152 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
CLPX-204ENST00000559152 CYP2E1P05181 493 aaPredicted RBP13.63□□□□□ -0.23
CLPX-204ENST00000559152 SSFA2P28290 1259 aa13.63□□□□□ -0.23
CLPX-204ENST00000559152 RFX5P48382 616 aaPredicted RBP13.63□□□□□ -0.23
CLPX-204ENST00000559152 CASP7P55210 303 aa13.63□□□□□ -0.23
CLPX-204ENST00000559152 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
CLPX-204ENST00000559152 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
CLPX-204ENST00000559152 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms