RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 ATP10DQ9P241 1426 aa10.74□□□□□ -0.69
COPS2-206ENST00000559016 UBR2Q8IWV8 1755 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 HMMRO75330 724 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 PSEN1P49768 467 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 RGS3P49796 1198 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 HDAC5Q9UQL6 1122 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 PAPPAQ13219 1627 aa10.73□□□□□ -0.69
COPS2-206ENST00000559016 NWD2Q9ULI1 1742 aa10.72□□□□□ -0.69
COPS2-206ENST00000559016 ANP32AP39687 249 aaKnown RBP10.72□□□□□ -0.69
COPS2-206ENST00000559016 DCTPP1Q9H773 170 aa10.72□□□□□ -0.69
COPS2-206ENST00000559016 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
COPS2-206ENST00000559016 KCNQ3O43525 872 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 LRP6O75581 1613 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 C5P01031 1676 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 GNAI2P04899 355 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 EIF2S2P20042 333 aaKnown RBP10.71□□□□□ -0.69
COPS2-206ENST00000559016 CABP4P57796 275 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 ERBB4Q15303 1308 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 C8orf34Q49A92 452 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 LARP1Q6PKG0 1096 aaKnown RBP10.71□□□□□ -0.69
COPS2-206ENST00000559016 SLC4A10Q6U841 1118 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 CHD1LQ86WJ1 897 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 SIRT2Q8IXJ6 389 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 TTC5Q8N0Z6 440 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 NFATC2IPQ8NCF5 419 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 FMNL2Q96PY5 1086 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
COPS2-206ENST00000559016 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
COPS2-206ENST00000559016 DISP2A7MBM2 1401 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 EIF5BO60841 1220 aaKnown RBP10.7□□□□□ -0.7
COPS2-206ENST00000559016 DDX58O95786 925 aaKnown RBP10.7□□□□□ -0.7
COPS2-206ENST00000559016 SNRPA1P09661 255 aaKnown RBP10.7□□□□□ -0.7
COPS2-206ENST00000559016 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
COPS2-206ENST00000559016 CEP85Q6P2H3 762 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 DNAAF4Q8WXU2 420 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 BTG4Q9NY30 223 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
COPS2-206ENST00000559016 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
COPS2-206ENST00000559016 F6X3S4 739 aa10.69□□□□□ -0.7
COPS2-206ENST00000559016 ALDH1L1O75891 902 aa10.69□□□□□ -0.7
COPS2-206ENST00000559016 KSR2Q6VAB6 950 aa10.69□□□□□ -0.7
COPS2-206ENST00000559016 MEIS3Q99687 375 aa10.69□□□□□ -0.7
COPS2-206ENST00000559016 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
COPS2-206ENST00000559016 STRN4Q9NRL3 753 aa10.69□□□□□ -0.7
COPS2-206ENST00000559016 MYT1Q01538 1121 aa10.68□□□□□ -0.7
COPS2-206ENST00000559016 SKAP1Q86WV1 359 aa10.68□□□□□ -0.7
COPS2-206ENST00000559016 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
COPS2-206ENST00000559016 ITGB4P16144 1822 aa10.68□□□□□ -0.7
COPS2-206ENST00000559016 PI4KAP2A4QPH2 592 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 UBTFL1P0CB47 393 aaPredicted RBP10.67□□□□□ -0.7
COPS2-206ENST00000559016 ATP8B2P98198 1209 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 ANKRD45Q5TZF3 282 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 PI4KAP1Q8N8J0 262 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 ZNF496Q96IT1 587 aaPredicted RBP10.67□□□□□ -0.7
COPS2-206ENST00000559016 USP44Q9H0E7 712 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 C1orf115Q9H7X2 142 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
COPS2-206ENST00000559016 ADCY9O60503 1353 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 GLI3P10071 1580 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 SLC39A6Q13433 755 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 BMP2KLQ5H9B9 411 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 LINS1Q8NG48 757 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 TEX13AQ9BXU3 409 aaPredicted RBP10.66□□□□□ -0.7
COPS2-206ENST00000559016 TOGARAM1Q9Y4F4 1720 aa10.66□□□□□ -0.7
COPS2-206ENST00000559016 KCPQ6ZWJ8 1503 aa10.65□□□□□ -0.7
COPS2-206ENST00000559016 PDIA6Q15084 440 aa10.65□□□□□ -0.7
COPS2-206ENST00000559016 IPO9Q96P70 1041 aaKnown RBP10.65□□□□□ -0.7
COPS2-206ENST00000559016 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
COPS2-206ENST00000559016 UPF2Q9HAU5 1272 aaKnown RBP10.65□□□□□ -0.7
COPS2-206ENST00000559016 SLIT2O94813 1529 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 UTYO14607 1347 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 FAM205CA6NFA0 338 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 EXOC5O00471 708 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
COPS2-206ENST00000559016 MTX1Q13505 466 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
COPS2-206ENST00000559016 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 MAP3K2Q9Y2U5 619 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
COPS2-206ENST00000559016 RAB11FIP3O75154 756 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 HSP90AB4PQ58FF6 505 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 SSH3Q8TE77 659 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 COL15A1P39059 1388 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 JCADQ9P266 1359 aa10.63□□□□□ -0.71
COPS2-206ENST00000559016 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 STK25O00506 426 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
COPS2-206ENST00000559016 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
COPS2-206ENST00000559016 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms