RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 EIF4A1P60842 406 aaKnown RBP7.38□□□□□ -1.23
SMAD3-209ENST00000558894 RASSF7Q02833 373 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 HLFQ16534 295 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 CLEC4GQ6UXB4 293 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 LRP10Q7Z4F1 713 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 DZIP3Q86Y13 1208 aaKnown RBP7.38□□□□□ -1.23
SMAD3-209ENST00000558894 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
SMAD3-209ENST00000558894 TAF1P21675 1872 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 POTECB2RU33 542 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 H0YIN7 160 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 TOMM70O94826 608 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 SRGNP10124 158 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 HSPA6P17066 643 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 RALBP1Q15311 655 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 TTLL6Q8N841 843 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 C7orf43Q8WVR3 580 aa7.37□□□□□ -1.23
SMAD3-209ENST00000558894 ZNF330Q9Y3S2 320 aaPredicted RBP7.37□□□□□ -1.23
SMAD3-209ENST00000558894 ADAMTSL1Q8N6G6 1762 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 DDX60Q8IY21 1712 aaKnown RBP7.36□□□□□ -1.23
SMAD3-209ENST00000558894 PDE6BP35913 854 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
SMAD3-209ENST00000558894 PDIA6Q15084 440 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 SETDB2Q96T68 719 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 RNF181Q9P0P0 153 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 SCN4AP35499 1836 aa7.36□□□□□ -1.23
SMAD3-209ENST00000558894 COL4A5P29400 1685 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 ZC3H4Q9UPT8 1303 aaKnown RBP7.35□□□□□ -1.23
SMAD3-209ENST00000558894 C21orf2O43822 256 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 LMNB1P20700 586 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 TMPOP42166 694 aaKnown RBP7.35□□□□□ -1.23
SMAD3-209ENST00000558894 STYK1Q6J9G0 422 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 TTLL7Q6ZT98 887 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 TNS4Q8IZW8 715 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 DNAJC5GQ8N7S2 189 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 CNBD1Q8NA66 436 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
SMAD3-209ENST00000558894 RRAGCQ9HB90 399 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 TRIM35Q9UPQ4 493 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 PDZRN3Q9UPQ7 1066 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 RIC1Q4ADV7 1423 aa7.35□□□□□ -1.23
SMAD3-209ENST00000558894 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 UBN2Q6ZU65 1347 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 MYBBP1AQ9BQG0 1328 aaKnown RBP7.34□□□□□ -1.23
SMAD3-209ENST00000558894 LTBP3Q9NS15 1303 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 RIPK4P57078 832 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 PRPF40BQ6NWY9 871 aaKnown RBP7.34□□□□□ -1.23
SMAD3-209ENST00000558894 ZNF34Q8IZ26 560 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 RBM46Q8TBY0 533 aaKnown RBP7.34□□□□□ -1.23
SMAD3-209ENST00000558894 ZNF622Q969S3 477 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMAD3-209ENST00000558894 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 NIP7Q9Y221 180 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMAD3-209ENST00000558894 COL4A1P02462 1669 aa7.34□□□□□ -1.23
SMAD3-209ENST00000558894 IBTKQ9P2D0 1353 aaPredicted RBP7.33□□□□□ -1.24
SMAD3-209ENST00000558894 MAP3K15Q6ZN16 1313 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 KDM2BQ8NHM5 1336 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 LTBP1Q14766 1721 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 GLTPD2A6NH11 291 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 ERVV-1B6SEH8 477 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 PROSER3Q2NL68 480 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 CRY2Q49AN0 593 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 OLFM4Q6UX06 510 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 SLC51AQ86UW1 340 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 NBPF5PQ86XG9 351 aaPredicted RBP7.33□□□□□ -1.24
SMAD3-209ENST00000558894 CNKSR1Q969H4 720 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 PRKRIP1Q9H875 184 aaPredicted RBP7.33□□□□□ -1.24
SMAD3-209ENST00000558894 BABAM1Q9NWV8 329 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF652Q9Y2D9 606 aa7.33□□□□□ -1.24
SMAD3-209ENST00000558894 LRRC37AA6NMS7 1700 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 ERBB4Q15303 1308 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 MAPK8IP3Q9UPT6 1336 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 CHL1O00533 1208 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 MYL6BP14649 208 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 ST5P78524 1137 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 KRT24Q2M2I5 525 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 ERFEQ4G0M1 354 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 SUSD4Q5VX71 490 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 C3orf67Q6ZVT6 689 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 CCDC146Q8IYE0 955 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 PNNQ9H307 717 aaKnown RBP7.32□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF219Q9P2Y4 722 aaPredicted RBP7.32□□□□□ -1.24
SMAD3-209ENST00000558894 ADAMTS8Q9UP79 889 aa7.32□□□□□ -1.24
SMAD3-209ENST00000558894 RRP7AQ9Y3A4 280 aaKnown RBP7.32□□□□□ -1.24
SMAD3-209ENST00000558894 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 NTSR2O95665 410 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 ANXA1P04083 346 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 NPR1P16066 1061 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 HOXA10P31260 410 aaPredicted RBP7.31□□□□□ -1.24
SMAD3-209ENST00000558894 HTRA3P83110 453 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 FSTL1Q12841 308 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 GIGYF2Q6Y7W6 1299 aaKnown RBP7.31□□□□□ -1.24
SMAD3-209ENST00000558894 NUTM1Q86Y26 1132 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 NGEFQ8N5V2 710 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 RUNDC1Q96C34 613 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 TAOK3Q9H2K8 898 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 ZBTB3Q9H5J0 574 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 TSPYL4Q9UJ04 414 aa7.31□□□□□ -1.24
SMAD3-209ENST00000558894 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
SMAD3-209ENST00000558894 NEFMP07197 916 aa7.3□□□□□ -1.24
SMAD3-209ENST00000558894 ZNF853P0CG23 659 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms