RNA–Protein interactions for RNA: ENST00000558705.1

PKNOX2-209, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-209ENST00000558705 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
PKNOX2-209ENST00000558705 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
PKNOX2-209ENST00000558705 HLFQ16534 295 aa18.27■□□□□ 0.52
PKNOX2-209ENST00000558705 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.52
PKNOX2-209ENST00000558705 WDR90Q96KV7 1748 aa18.26■□□□□ 0.51
PKNOX2-209ENST00000558705 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
PKNOX2-209ENST00000558705 SRGNP10124 158 aa18.26■□□□□ 0.51
PKNOX2-209ENST00000558705 ST5P78524 1137 aa18.26■□□□□ 0.51
PKNOX2-209ENST00000558705 HTRA3P83110 453 aa18.26■□□□□ 0.51
PKNOX2-209ENST00000558705 NPHP1O15259 732 aa18.25■□□□□ 0.51
PKNOX2-209ENST00000558705 APLP1P51693 650 aa18.25■□□□□ 0.51
PKNOX2-209ENST00000558705 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
PKNOX2-209ENST00000558705 CLEC4GQ6UXB4 293 aa18.25■□□□□ 0.51
PKNOX2-209ENST00000558705 NBPF5PQ86XG9 351 aaPredicted RBP18.25■□□□□ 0.51
PKNOX2-209ENST00000558705 ZC3H4Q9UPT8 1303 aaKnown RBP18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 GLTPD2A6NH11 291 aa18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 STYK1Q6J9G0 422 aa18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 DNAJC5GQ8N7S2 189 aa18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 PDZRN3Q9UPQ7 1066 aa18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
PKNOX2-209ENST00000558705 NUP98P52948 1817 aa18.23■□□□□ 0.51
PKNOX2-209ENST00000558705 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
PKNOX2-209ENST00000558705 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
PKNOX2-209ENST00000558705 ZNF652Q9Y2D9 606 aa18.23■□□□□ 0.51
PKNOX2-209ENST00000558705 POTECB2RU33 542 aa18.22■□□□□ 0.51
PKNOX2-209ENST00000558705 NEFMP07197 916 aa18.22■□□□□ 0.51
PKNOX2-209ENST00000558705 OLFM4Q6UX06 510 aa18.22■□□□□ 0.51
PKNOX2-209ENST00000558705 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
PKNOX2-209ENST00000558705 PNISRQ8TF01 805 aaKnown RBP18.21■□□□□ 0.51
PKNOX2-209ENST00000558705 C7orf43Q8WVR3 580 aa18.21■□□□□ 0.51
PKNOX2-209ENST00000558705 CNKSR1Q969H4 720 aa18.21■□□□□ 0.51
PKNOX2-209ENST00000558705 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
PKNOX2-209ENST00000558705 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
PKNOX2-209ENST00000558705 ABCC12Q96J65 1359 aa18.2■□□□□ 0.5
PKNOX2-209ENST00000558705 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
PKNOX2-209ENST00000558705 FSTL1Q12841 308 aa18.2■□□□□ 0.5
PKNOX2-209ENST00000558705 DDX10Q13206 875 aaKnown RBP18.2■□□□□ 0.5
PKNOX2-209ENST00000558705 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
PKNOX2-209ENST00000558705 RGL2O15211 777 aa18.19■□□□□ 0.5
PKNOX2-209ENST00000558705 MYL6BP14649 208 aa18.19■□□□□ 0.5
PKNOX2-209ENST00000558705 ERFEQ4G0M1 354 aa18.19■□□□□ 0.5
PKNOX2-209ENST00000558705 TAOK3Q9H2K8 898 aa18.19■□□□□ 0.5
PKNOX2-209ENST00000558705 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
PKNOX2-209ENST00000558705 RALBP1Q15311 655 aa18.18■□□□□ 0.5
PKNOX2-209ENST00000558705 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
PKNOX2-209ENST00000558705 NUTM1Q86Y26 1132 aa18.18■□□□□ 0.5
PKNOX2-209ENST00000558705 MAP3K15Q6ZN16 1313 aa18.18■□□□□ 0.5
PKNOX2-209ENST00000558705 NPR1P16066 1061 aa18.17■□□□□ 0.5
PKNOX2-209ENST00000558705 RIPK4P57078 832 aa18.17■□□□□ 0.5
PKNOX2-209ENST00000558705 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
PKNOX2-209ENST00000558705 UBN2Q6ZU65 1347 aa18.17■□□□□ 0.5
PKNOX2-209ENST00000558705 GPTP24298 496 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 SLC51AQ86UW1 340 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 SMC1BQ8NDV3 1235 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
PKNOX2-209ENST00000558705 ERVV-1B6SEH8 477 aa18.15■□□□□ 0.5
PKNOX2-209ENST00000558705 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
PKNOX2-209ENST00000558705 PDIA6Q15084 440 aa18.15■□□□□ 0.5
PKNOX2-209ENST00000558705 PROSER3Q2NL68 480 aa18.15■□□□□ 0.5
PKNOX2-209ENST00000558705 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
PKNOX2-209ENST00000558705 DDNO94850 711 aaPredicted RBP18.14■□□□□ 0.49
PKNOX2-209ENST00000558705 ANXA1P04083 346 aa18.14■□□□□ 0.49
PKNOX2-209ENST00000558705 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
PKNOX2-209ENST00000558705 SNED1Q8TER0 1413 aa18.14■□□□□ 0.49
PKNOX2-209ENST00000558705 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 SOGA3Q5TF21 947 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 KIF6Q6ZMV9 814 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
PKNOX2-209ENST00000558705 EIF2S2P20042 333 aaKnown RBP18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 KRT24Q2M2I5 525 aa18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 CRY2Q49AN0 593 aa18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 ZNF34Q8IZ26 560 aa18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 KLRG1Q96E93 195 aa18.12■□□□□ 0.49
PKNOX2-209ENST00000558705 NTSR2O95665 410 aa18.11■□□□□ 0.49
PKNOX2-209ENST00000558705 FKBP4Q02790 459 aaKnown RBP eCLIP18.11■□□□□ 0.49
PKNOX2-209ENST00000558705 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
PKNOX2-209ENST00000558705 NECTIN2Q92692 538 aa18.11■□□□□ 0.49
PKNOX2-209ENST00000558705 ZNF541Q9H0D2 1346 aa18.11■□□□□ 0.49
PKNOX2-209ENST00000558705 COL4A5P29400 1685 aa18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 GIGYF2Q6Y7W6 1299 aaKnown RBP18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 NYXQ9GZU5 481 aa18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
PKNOX2-209ENST00000558705 RIC1Q4ADV7 1423 aa18.09■□□□□ 0.49
PKNOX2-209ENST00000558705 ANKRD36CQ5JPF3 1778 aa18.09■□□□□ 0.49
PKNOX2-209ENST00000558705 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
PKNOX2-209ENST00000558705 JMYQ8N9B5 988 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms