RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 GPR162Q16538 588 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
SEMA6D-209ENST00000558431 GNPATO15228 680 aa13.11□□□□□ -0.31
SEMA6D-209ENST00000558431 HMOX1P09601 288 aa13.11□□□□□ -0.31
SEMA6D-209ENST00000558431 SMIM5Q71RC9 77 aa13.11□□□□□ -0.31
SEMA6D-209ENST00000558431 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
SEMA6D-209ENST00000558431 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
SEMA6D-209ENST00000558431 KDRP35968 1356 aa13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 DIAPH1O60610 1272 aaKnown RBP13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 ITPK1Q13572 414 aa13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
SEMA6D-209ENST00000558431 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
SEMA6D-209ENST00000558431 SSFA2P28290 1259 aa13.09□□□□□ -0.31
SEMA6D-209ENST00000558431 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
SEMA6D-209ENST00000558431 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
SEMA6D-209ENST00000558431 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
SEMA6D-209ENST00000558431 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
SEMA6D-209ENST00000558431 MYH14Q7Z406 1995 aaKnown RBP13.08□□□□□ -0.32
SEMA6D-209ENST00000558431 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
SEMA6D-209ENST00000558431 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
SEMA6D-209ENST00000558431 PTCD1O75127 700 aaKnown RBP13.07□□□□□ -0.32
SEMA6D-209ENST00000558431 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
SEMA6D-209ENST00000558431 AKAP4Q5JQC9 854 aa13.06□□□□□ -0.32
SEMA6D-209ENST00000558431 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
SEMA6D-209ENST00000558431 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
SEMA6D-209ENST00000558431 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
SEMA6D-209ENST00000558431 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
SEMA6D-209ENST00000558431 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
SEMA6D-209ENST00000558431 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
SEMA6D-209ENST00000558431 C4AP0C0L4 1744 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 TJP1Q07157 1748 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 PLCB2Q00722 1185 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 DDX10Q13206 875 aaKnown RBP13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
SEMA6D-209ENST00000558431 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
SEMA6D-209ENST00000558431 EVI5O60447 810 aa13.02□□□□□ -0.33
SEMA6D-209ENST00000558431 RFC4P35249 363 aa13.02□□□□□ -0.33
SEMA6D-209ENST00000558431 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
SEMA6D-209ENST00000558431 COL3A1P02461 1466 aaPredicted RBP13.02□□□□□ -0.33
SEMA6D-209ENST00000558431 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 MMP10P09238 476 aa13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 UTRNP46939 3433 aa13.01□□□□□ -0.33
SEMA6D-209ENST00000558431 SLC39A6Q13433 755 aa13□□□□□ -0.33
SEMA6D-209ENST00000558431 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
SEMA6D-209ENST00000558431 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
SEMA6D-209ENST00000558431 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
SEMA6D-209ENST00000558431 N4BP2Q86UW6 1770 aaPredicted RBP12.99□□□□□ -0.33
SEMA6D-209ENST00000558431 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
SEMA6D-209ENST00000558431 MRC1P22897 1456 aa12.99□□□□□ -0.33
SEMA6D-209ENST00000558431 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
SEMA6D-209ENST00000558431 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
SEMA6D-209ENST00000558431 KIF13BQ9NQT8 1826 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 ANP32CO43423 234 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 CAMK2BQ13554 666 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
SEMA6D-209ENST00000558431 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 DPYSL4O14531 572 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 U2AF1L5P0DN76 240 aaPredicted RBP12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 GYS1P13807 737 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 U2AF1Q01081 240 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 TEFQ10587 303 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 E2F4Q16254 413 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 CCDC87Q9NVE4 849 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 SRP68Q9UHB9 627 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 GOLGB1Q14789 3259 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SEMA6D-209ENST00000558431 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
SEMA6D-209ENST00000558431 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
SEMA6D-209ENST00000558431 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
SEMA6D-209ENST00000558431 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
SEMA6D-209ENST00000558431 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
SEMA6D-209ENST00000558431 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
SEMA6D-209ENST00000558431 ZPR1O75312 459 aa12.94□□□□□ -0.34
SEMA6D-209ENST00000558431 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
SEMA6D-209ENST00000558431 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
SEMA6D-209ENST00000558431 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
SEMA6D-209ENST00000558431 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
SEMA6D-209ENST00000558431 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
SEMA6D-209ENST00000558431 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms