RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IFT57Q9NWB7 429 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 SIPA1L3O60292 1781 aaPredicted RBP11.03□□□□□ -0.64
TPM1-213ENST00000558400 UBR2Q8IWV8 1755 aa11.03□□□□□ -0.64
TPM1-213ENST00000558400 TJP1Q07157 1748 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 ERVV-1B6SEH8 477 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
TPM1-213ENST00000558400 SERPINB2P05120 415 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 ZNF853P0CG23 659 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 NBPF10Q6P3W6 841 aaKnown RBP11.02□□□□□ -0.65
TPM1-213ENST00000558400 NBPF15Q8N660 670 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
TPM1-213ENST00000558400 CAMTA2O94983 1202 aa11.01□□□□□ -0.65
TPM1-213ENST00000558400 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
TPM1-213ENST00000558400 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
TPM1-213ENST00000558400 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
TPM1-213ENST00000558400 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
TPM1-213ENST00000558400 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
TPM1-213ENST00000558400 DLG5Q8TDM6 1919 aa11□□□□□ -0.65
TPM1-213ENST00000558400 CCER2I3L3R5 266 aa11□□□□□ -0.65
TPM1-213ENST00000558400 DDR1Q08345 913 aa11□□□□□ -0.65
TPM1-213ENST00000558400 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
TPM1-213ENST00000558400 BICDL1Q6ZP65 573 aa11□□□□□ -0.65
TPM1-213ENST00000558400 WDR63Q8IWG1 891 aa11□□□□□ -0.65
TPM1-213ENST00000558400 MBIPQ9NS73 344 aa11□□□□□ -0.65
TPM1-213ENST00000558400 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
TPM1-213ENST00000558400 IL16Q14005 1332 aa11□□□□□ -0.65
TPM1-213ENST00000558400 NPHP1O15259 732 aa10.99□□□□□ -0.65
TPM1-213ENST00000558400 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
TPM1-213ENST00000558400 TBC1D9BQ66K14 1250 aa10.99□□□□□ -0.65
TPM1-213ENST00000558400 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
TPM1-213ENST00000558400 DDX21Q9NR30 783 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM1-213ENST00000558400 A0A0G2JLW4 131 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 ZBTB22O15209 634 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 MYL6BP14649 208 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 PDE6BP35913 854 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 DUSP27Q5VZP5 1158 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 BRIP1Q9BX63 1249 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 PIM2Q9P1W9 311 aa10.98□□□□□ -0.65
TPM1-213ENST00000558400 DBF4Q9UBU7 674 aaPredicted RBP10.98□□□□□ -0.65
TPM1-213ENST00000558400 H0YIN7 160 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 DPEP1P16444 411 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 PDIA6Q15084 440 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 HDGFL1Q5TGJ6 251 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 JMYQ8N9B5 988 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-213ENST00000558400 MAP3K15Q6ZN16 1313 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
TPM1-213ENST00000558400 TOMM70O94826 608 aa10.96□□□□□ -0.65
TPM1-213ENST00000558400 GTF2E1P29083 439 aaPredicted RBP10.96□□□□□ -0.65
TPM1-213ENST00000558400 ST5P78524 1137 aa10.96□□□□□ -0.65
TPM1-213ENST00000558400 HSP90AB3PQ58FF7 597 aa10.96□□□□□ -0.65
TPM1-213ENST00000558400 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
TPM1-213ENST00000558400 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
TPM1-213ENST00000558400 CNBD1Q8NA66 436 aa10.96□□□□□ -0.65
TPM1-213ENST00000558400 NYXQ9GZU5 481 aa10.96□□□□□ -0.65
TPM1-213ENST00000558400 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 KCNA3P22001 575 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 HLFQ16534 295 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
TPM1-213ENST00000558400 CCDC30Q5VVM6 783 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 DIEXFQ68CQ4 756 aaKnown RBP10.95□□□□□ -0.66
TPM1-213ENST00000558400 TTLL7Q6ZT98 887 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 COPS6Q7L5N1 327 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
TPM1-213ENST00000558400 ELL2O00472 640 aaPredicted RBP10.94□□□□□ -0.66
TPM1-213ENST00000558400 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 PARP10Q53GL7 1025 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 PRR5LQ6MZQ0 368 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 PPP1R42Q7Z4L9 355 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
TPM1-213ENST00000558400 C4AP0C0L4 1744 aa10.94□□□□□ -0.66
TPM1-213ENST00000558400 AIMP1Q12904 312 aaKnown RBP10.93□□□□□ -0.66
TPM1-213ENST00000558400 C2CD5Q86YS7 1000 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 ZNF34Q8IZ26 560 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 TTLL6Q8N841 843 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 PLBD2Q8NHP8 589 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 XAGE3Q8WTP9 111 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 MYH16Q9H6N6 1097 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
TPM1-213ENST00000558400 ANXA1P04083 346 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 CHRNA5P30532 468 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 TCIRG1Q13488 830 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 POLA2Q14181 598 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 PROSER3Q2NL68 480 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 TWISTNBQ3B726 338 aaPredicted RBP10.92□□□□□ -0.66
TPM1-213ENST00000558400 CNKSR1Q969H4 720 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 STK31Q9BXU1 1019 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 KIF13BQ9NQT8 1826 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
TPM1-213ENST00000558400 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms