RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 RASSF7Q02833 373 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
HERC1-202ENST00000558324 TTLL6Q8N841 843 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 BRIP1Q9BX63 1249 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 RNF181Q9P0P0 153 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 ADAMTS8Q9UP79 889 aa15.66■□□□□ 0.1
HERC1-202ENST00000558324 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
HERC1-202ENST00000558324 PDE6BP35913 854 aa15.65■□□□□ 0.1
HERC1-202ENST00000558324 HLFQ16534 295 aa15.65■□□□□ 0.1
HERC1-202ENST00000558324 CLEC4GQ6UXB4 293 aa15.65■□□□□ 0.1
HERC1-202ENST00000558324 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
HERC1-202ENST00000558324 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
HERC1-202ENST00000558324 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
HERC1-202ENST00000558324 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
HERC1-202ENST00000558324 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
HERC1-202ENST00000558324 KIF6Q6ZMV9 814 aa15.63■□□□□ 0.09
HERC1-202ENST00000558324 TTLL7Q6ZT98 887 aa15.63■□□□□ 0.09
HERC1-202ENST00000558324 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
HERC1-202ENST00000558324 KIF3CO14782 793 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 NECTIN2Q92692 538 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
HERC1-202ENST00000558324 C21orf2O43822 256 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 ANXA1P04083 346 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 SRGNP10124 158 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 GPTP24298 496 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 GTF2E1P29083 439 aaPredicted RBP15.6■□□□□ 0.09
HERC1-202ENST00000558324 KRT24Q2M2I5 525 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
HERC1-202ENST00000558324 ERVV-1B6SEH8 477 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 NFKBIEO00221 500 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 RGL2O15211 777 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 PRELPP51888 382 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 PROSER3Q2NL68 480 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 PRPF40BQ6NWY9 871 aaKnown RBP15.59■□□□□ 0.09
HERC1-202ENST00000558324 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
HERC1-202ENST00000558324 LMNB1P20700 586 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 CNKSR1Q969H4 720 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 CACNA1SQ13698 1873 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 ABCC12Q96J65 1359 aa15.58■□□□□ 0.08
HERC1-202ENST00000558324 CHL1O00533 1208 aa15.57■□□□□ 0.08
HERC1-202ENST00000558324 APAF1O14727 1248 aa15.57■□□□□ 0.08
HERC1-202ENST00000558324 PDIA6Q15084 440 aa15.57■□□□□ 0.08
HERC1-202ENST00000558324 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
HERC1-202ENST00000558324 SBF1O95248 1867 aa15.57■□□□□ 0.08
HERC1-202ENST00000558324 NPR1P16066 1061 aa15.56■□□□□ 0.08
HERC1-202ENST00000558324 CCDC184Q52MB2 194 aa15.56■□□□□ 0.08
HERC1-202ENST00000558324 NYXQ9GZU5 481 aa15.56■□□□□ 0.08
HERC1-202ENST00000558324 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
HERC1-202ENST00000558324 KDM2BQ8NHM5 1336 aa15.56■□□□□ 0.08
HERC1-202ENST00000558324 SLX4Q8IY92 1834 aa15.55■□□□□ 0.08
HERC1-202ENST00000558324 TIAM2Q8IVF5 1701 aa15.55■□□□□ 0.08
HERC1-202ENST00000558324 AIMP1Q12904 312 aaKnown RBP15.55■□□□□ 0.08
HERC1-202ENST00000558324 ERFEQ4G0M1 354 aa15.55■□□□□ 0.08
HERC1-202ENST00000558324 LRP10Q7Z4F1 713 aa15.55■□□□□ 0.08
HERC1-202ENST00000558324 NUP98P52948 1817 aa15.54■□□□□ 0.08
HERC1-202ENST00000558324 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
HERC1-202ENST00000558324 SUSD4Q5VX71 490 aa15.54■□□□□ 0.08
HERC1-202ENST00000558324 GIGYF2Q6Y7W6 1299 aaKnown RBP15.54■□□□□ 0.08
HERC1-202ENST00000558324 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
HERC1-202ENST00000558324 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
HERC1-202ENST00000558324 ARFGEF2Q9Y6D5 1785 aa15.54■□□□□ 0.08
HERC1-202ENST00000558324 KLRG2A4D1S0 409 aaPredicted RBP15.53■□□□□ 0.08
HERC1-202ENST00000558324 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 C16orf71Q8IYS4 520 aaPredicted RBP15.53■□□□□ 0.08
HERC1-202ENST00000558324 ZNF34Q8IZ26 560 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 CHPF2Q9P2E5 772 aa15.53■□□□□ 0.08
HERC1-202ENST00000558324 IBTKQ9P2D0 1353 aaPredicted RBP15.52■□□□□ 0.08
HERC1-202ENST00000558324 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
HERC1-202ENST00000558324 TOMM70O94826 608 aa15.52■□□□□ 0.08
HERC1-202ENST00000558324 HSPA6P17066 643 aa15.52■□□□□ 0.08
HERC1-202ENST00000558324 SOGA3Q5TF21 947 aa15.52■□□□□ 0.08
HERC1-202ENST00000558324 OLFM4Q6UX06 510 aa15.52■□□□□ 0.08
HERC1-202ENST00000558324 FER1L6Q2WGJ9 1857 aa15.52■□□□□ 0.07
HERC1-202ENST00000558324 NTSR2O95665 410 aa15.51■□□□□ 0.07
HERC1-202ENST00000558324 CCDC93Q567U6 631 aa15.51■□□□□ 0.07
HERC1-202ENST00000558324 RPGRQ92834 1020 aaKnown RBP15.51■□□□□ 0.07
HERC1-202ENST00000558324 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
HERC1-202ENST00000558324 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
HERC1-202ENST00000558324 LTBP3Q9NS15 1303 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 GLTPD2A6NH11 291 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 PARP10Q53GL7 1025 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 PPP1R42Q7Z4L9 355 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
HERC1-202ENST00000558324 ANP32CO43423 234 aa15.49■□□□□ 0.07
HERC1-202ENST00000558324 ALDH1B1P30837 517 aa15.49■□□□□ 0.07
HERC1-202ENST00000558324 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
HERC1-202ENST00000558324 CRY2Q49AN0 593 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms