RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
SPG11-205ENST00000558080 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
SPG11-205ENST00000558080 PPP1R1BQ9UD71 204 aaPredicted RBP10.35□□□□□ -0.75
SPG11-205ENST00000558080 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
SPG11-205ENST00000558080 TOGARAM1Q9Y4F4 1720 aa10.35□□□□□ -0.75
SPG11-205ENST00000558080 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
SPG11-205ENST00000558080 KCNQ4P56696 695 aa10.34□□□□□ -0.75
SPG11-205ENST00000558080 EYA1Q99502 592 aa10.34□□□□□ -0.75
SPG11-205ENST00000558080 LRRC4BQ9NT99 713 aa10.34□□□□□ -0.75
SPG11-205ENST00000558080 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
SPG11-205ENST00000558080 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
SPG11-205ENST00000558080 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
SPG11-205ENST00000558080 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
SPG11-205ENST00000558080 C5P01031 1676 aa10.32□□□□□ -0.76
SPG11-205ENST00000558080 NSD2O96028 1365 aa10.32□□□□□ -0.76
SPG11-205ENST00000558080 CYP27B1O15528 508 aa10.32□□□□□ -0.76
SPG11-205ENST00000558080 EIF4A2Q14240 407 aaKnown RBP10.32□□□□□ -0.76
SPG11-205ENST00000558080 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
SPG11-205ENST00000558080 MORC1Q86VD1 984 aa10.32□□□□□ -0.76
SPG11-205ENST00000558080 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
SPG11-205ENST00000558080 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
SPG11-205ENST00000558080 ARIH1Q9Y4X5 557 aaPredicted RBP10.31□□□□□ -0.76
SPG11-205ENST00000558080 NCAPD2Q15021 1401 aa10.31□□□□□ -0.76
SPG11-205ENST00000558080 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
SPG11-205ENST00000558080 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
SPG11-205ENST00000558080 CCNL1Q9UK58 526 aaPredicted RBP10.3□□□□□ -0.76
SPG11-205ENST00000558080 SPG7Q9UQ90 795 aa10.3□□□□□ -0.76
SPG11-205ENST00000558080 CHD4Q14839 1912 aa10.29□□□□□ -0.76
SPG11-205ENST00000558080 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
SPG11-205ENST00000558080 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
SPG11-205ENST00000558080 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
SPG11-205ENST00000558080 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
SPG11-205ENST00000558080 PRSS12P56730 875 aa10.28□□□□□ -0.76
SPG11-205ENST00000558080 E2F4Q16254 413 aa10.28□□□□□ -0.76
SPG11-205ENST00000558080 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
SPG11-205ENST00000558080 TFCP2L1Q9NZI6 479 aa10.28□□□□□ -0.76
SPG11-205ENST00000558080 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.77
SPG11-205ENST00000558080 PIGBQ92521 554 aa10.27□□□□□ -0.77
SPG11-205ENST00000558080 PNPLA7Q6ZV29 1317 aa10.27□□□□□ -0.77
SPG11-205ENST00000558080 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 PHKG2P15735 406 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 PPP4CP60510 307 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
SPG11-205ENST00000558080 IFNL2Q8IZJ0 200 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 C4BP0C0L5 1744 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 IGSF1Q8N6C5 1336 aa10.26□□□□□ -0.77
SPG11-205ENST00000558080 CC2D1BQ5T0F9 858 aaKnown RBP10.25□□□□□ -0.77
SPG11-205ENST00000558080 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SPG11-205ENST00000558080 ARXQ96QS3 562 aa10.25□□□□□ -0.77
SPG11-205ENST00000558080 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
SPG11-205ENST00000558080 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
SPG11-205ENST00000558080 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
SPG11-205ENST00000558080 COL23A1Q86Y22 540 aaPredicted RBP10.24□□□□□ -0.77
SPG11-205ENST00000558080 AEBP1Q8IUX7 1158 aa10.24□□□□□ -0.77
SPG11-205ENST00000558080 SLC16A10Q8TF71 515 aa10.24□□□□□ -0.77
SPG11-205ENST00000558080 SMARCC1Q92922 1105 aaPredicted RBP10.24□□□□□ -0.77
SPG11-205ENST00000558080 SYT17Q9BSW7 474 aa10.24□□□□□ -0.77
SPG11-205ENST00000558080 TMOD3Q9NYL9 352 aa10.24□□□□□ -0.77
SPG11-205ENST00000558080 MYH14Q7Z406 1995 aaKnown RBP10.23□□□□□ -0.77
SPG11-205ENST00000558080 NBPF26B4DH59 902 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 SMAPO00193 183 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 MTHFSP49914 203 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 TJAP1Q5JTD0 557 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 ZNF530Q6P9A1 599 aaPredicted RBP10.23□□□□□ -0.77
SPG11-205ENST00000558080 TATDN2Q93075 761 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
SPG11-205ENST00000558080 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
SPG11-205ENST00000558080 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
SPG11-205ENST00000558080 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
SPG11-205ENST00000558080 POLD1P28340 1107 aa10.22□□□□□ -0.77
SPG11-205ENST00000558080 IL13P35225 146 aa10.22□□□□□ -0.77
SPG11-205ENST00000558080 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
SPG11-205ENST00000558080 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
SPG11-205ENST00000558080 COL5A3P25940 1745 aaPredicted RBP10.21□□□□□ -0.77
SPG11-205ENST00000558080 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 SIK1P57059 783 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 AMOTQ4VCS5 1084 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 MSL1Q68DK7 614 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 Q6ZNB5 142 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 AK7Q96M32 723 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
SPG11-205ENST00000558080 ERVV-2B6SEH9 535 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 HSP90AB1P08238 724 aaKnown RBP10.2□□□□□ -0.78
SPG11-205ENST00000558080 HMOX1P09601 288 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 OSBPP22059 807 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 YY1P25490 414 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 ZNF831Q5JPB2 1677 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 C1orf141Q5JVX7 400 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 LINC00116Q8NCU8 138 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
SPG11-205ENST00000558080 KDM6AO15550 1401 aaPredicted RBP10.19□□□□□ -0.78
SPG11-205ENST00000558080 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
SPG11-205ENST00000558080 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
SPG11-205ENST00000558080 CABP4P57796 275 aa10.19□□□□□ -0.78
SPG11-205ENST00000558080 ITPK1Q13572 414 aa10.19□□□□□ -0.78
SPG11-205ENST00000558080 LAPTM4AQ15012 233 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms