RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
TRPM1-204ENST00000557948 HACL1Q9UJ83 578 aa8.3□□□□□ -1.08
TRPM1-204ENST00000557948 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
TRPM1-204ENST00000557948 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
TRPM1-204ENST00000557948 EPHX2P34913 555 aa8.29□□□□□ -1.08
TRPM1-204ENST00000557948 MON2Q7Z3U7 1717 aa8.29□□□□□ -1.08
TRPM1-204ENST00000557948 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
TRPM1-204ENST00000557948 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 CIAPIN1Q6FI81 312 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 NME9Q86XW9 330 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 BCL11AQ9H165 835 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 TAOK3Q9H2K8 898 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
TRPM1-204ENST00000557948 AFDNP55196 1824 aaKnown RBP8.28□□□□□ -1.08
TRPM1-204ENST00000557948 COL5A3P25940 1745 aaPredicted RBP8.27□□□□□ -1.09
TRPM1-204ENST00000557948 POLRMTO00411 1230 aaKnown RBP8.27□□□□□ -1.09
TRPM1-204ENST00000557948 RPS6KA4O75676 772 aa8.27□□□□□ -1.09
TRPM1-204ENST00000557948 RC3H1Q5TC82 1133 aaKnown RBP8.27□□□□□ -1.09
TRPM1-204ENST00000557948 C2CD5Q86YS7 1000 aa8.27□□□□□ -1.09
TRPM1-204ENST00000557948 TMOD3Q9NYL9 352 aa8.27□□□□□ -1.09
TRPM1-204ENST00000557948 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
TRPM1-204ENST00000557948 EVC2Q86UK5 1308 aa8.27□□□□□ -1.09
TRPM1-204ENST00000557948 H0YIN7 160 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 C21orf2O43822 256 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 SRP68Q9UHB9 627 aaKnown RBP8.26□□□□□ -1.09
TRPM1-204ENST00000557948 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
TRPM1-204ENST00000557948 CNTNAP4Q9C0A0 1308 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 LTBP3Q9NS15 1303 aa8.26□□□□□ -1.09
TRPM1-204ENST00000557948 CYP27B1O15528 508 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 AMPHP49418 695 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 CTU1Q7Z7A3 348 aaKnown RBP8.25□□□□□ -1.09
TRPM1-204ENST00000557948 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 USP42Q9H9J4 1324 aaKnown RBP8.25□□□□□ -1.09
TRPM1-204ENST00000557948 AKAP11Q9UKA4 1901 aa8.25□□□□□ -1.09
TRPM1-204ENST00000557948 ZNF831Q5JPB2 1677 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 TRIOBPQ9H2D6 2365 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 HOXC9P31274 260 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 FMR1Q06787 632 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRPM1-204ENST00000557948 CST9Q5W186 159 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 ZNF622Q969S3 477 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRPM1-204ENST00000557948 MS4A3Q96HJ5 214 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 TMEM106CQ9BVX2 250 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 MAP3K19Q56UN5 1328 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 RNF123Q5XPI4 1314 aa8.24□□□□□ -1.09
TRPM1-204ENST00000557948 CACNA1SQ13698 1873 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 TM4SF1P30408 202 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 NOGQ13253 232 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 SAPCD2Q86UD0 394 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 HHIPL1Q96JK4 782 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 ATG3Q9NT62 314 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 COLQQ9Y215 455 aaPredicted RBP8.23□□□□□ -1.09
TRPM1-204ENST00000557948 NRXN2Q9P2S2 1712 aa8.23□□□□□ -1.09
TRPM1-204ENST00000557948 KDRP35968 1356 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 TRAF5O00463 557 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 ZPR1O75312 459 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 SAGE1Q9NXZ1 904 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 COL6A3P12111 3177 aa8.22□□□□□ -1.09
TRPM1-204ENST00000557948 PKN2Q16513 984 aaKnown RBP8.21□□□□□ -1.1
TRPM1-204ENST00000557948 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
TRPM1-204ENST00000557948 MKI67P46013 3256 aaKnown RBP8.21□□□□□ -1.1
TRPM1-204ENST00000557948 SBNO2Q9Y2G9 1366 aa8.21□□□□□ -1.1
TRPM1-204ENST00000557948 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
TRPM1-204ENST00000557948 CELF2O95319 508 aaKnown RBP8.2□□□□□ -1.1
TRPM1-204ENST00000557948 SERPINB2P05120 415 aa8.2□□□□□ -1.1
TRPM1-204ENST00000557948 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
TRPM1-204ENST00000557948 SOGA3Q5TF21 947 aa8.2□□□□□ -1.1
TRPM1-204ENST00000557948 ANP32EQ9BTT0 268 aa8.2□□□□□ -1.1
TRPM1-204ENST00000557948 INSRP06213 1382 aa8.2□□□□□ -1.1
TRPM1-204ENST00000557948 TRPA1O75762 1119 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 CRKLP46109 303 aaKnown RBP8.19□□□□□ -1.1
TRPM1-204ENST00000557948 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 NFIXQ14938 502 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 ZIC5Q96T25 663 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 SCN11AQ9UI33 1791 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 SLX4Q8IY92 1834 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 CEP290O15078 2479 aa8.19□□□□□ -1.1
TRPM1-204ENST00000557948 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
TRPM1-204ENST00000557948 ANKRD31Q8N7Z5 1873 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 PDE6BP35913 854 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 E2F4Q16254 413 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 HDGFL2Q7Z4V5 671 aaPredicted RBP8.18□□□□□ -1.1
TRPM1-204ENST00000557948 GPC2Q8N158 579 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 HDAC9Q9UKV0 1011 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 CARMIL3Q8ND23 1372 aa8.18□□□□□ -1.1
TRPM1-204ENST00000557948 EDC4Q6P2E9 1401 aaKnown RBP8.18□□□□□ -1.1
TRPM1-204ENST00000557948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms