RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LARGE1O95461 756 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 DNM1Q05193 864 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 C17orf53Q8N3J3 647 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 GOLGA6L6A8MZA4 724 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 CPA1P15085 419 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 JAKMIP1Q96N16 626 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 KIF3AQ9Y496 699 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 CYP46A1Q9Y6A2 500 aa14.13□□□□□ -0.15
VIPAS39-211ENST00000557658 CCDC192P0DO97 292 aa14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 OS9Q13438 667 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 PRDM4Q9UKN5 801 aa14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 DIP2BQ9P265 1576 aa14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 NBPF7P0C2Y1 421 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
VIPAS39-211ENST00000557658 PLEKHG1Q9ULL1 1385 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 VPS37CA5D8V6 355 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 HOXC9P31274 260 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 CHAF1AQ13111 956 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 PRPF40BQ6NWY9 871 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 ZNF710Q8N1W2 664 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 CLASRPQ8N2M8 674 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 DNAAF4Q8WXU2 420 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 KCNB2Q92953 911 aa14.11□□□□□ -0.15
VIPAS39-211ENST00000557658 NLRP6P59044 892 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 BEND3Q5T5X7 828 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 GPATCH3Q96I76 525 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 ZKSCAN1P17029 563 aaPredicted RBP14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 PTH1RQ03431 593 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 TSC1Q92574 1164 aa14.1□□□□□ -0.15
VIPAS39-211ENST00000557658 CHD2O14647 1828 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 AP5Z1O43299 807 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 ADCK5Q3MIX3 580 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 JARID2Q92833 1246 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 HOXB7P09629 217 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 KRT85P78386 507 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 KCNF1Q9H3M0 494 aa14.09□□□□□ -0.15
VIPAS39-211ENST00000557658 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 MAP3K11Q16584 847 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 ME3Q16798 604 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 LARP1BQ659C4 914 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 NUP62CLQ9H1M0 184 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 PYCARDQ9ULZ3 195 aa14.08□□□□□ -0.16
VIPAS39-211ENST00000557658 CCDC171Q6TFL3 1326 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 IFIT2P09913 472 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 PDCP20941 246 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 MTX1Q13505 466 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 ERC1Q8IUD2 1116 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 EVI5LQ96CN4 794 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 LTV1Q96GA3 475 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 CHPF2Q9P2E5 772 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 ELP1O95163 1332 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 LTKP29376 864 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 EIF4A1P60842 406 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 ST3GAL1Q11201 340 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 SLC26A8Q96RN1 970 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
VIPAS39-211ENST00000557658 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 PSMA5P28066 241 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 KCNJ4P48050 445 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 TTC6Q86TZ1 520 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 NECAB1Q8N987 351 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 DIP2AQ14689 1571 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 HIP1O00291 1037 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 CREB3L3Q68CJ9 461 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 AMOTL2Q9Y2J4 779 aa14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-211ENST00000557658 TYRO3Q06418 890 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 HDAC5Q9UQL6 1122 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 DTNBO60941 627 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 TPCN1Q9ULQ1 816 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 MRVI1Q9Y6F6 885 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
VIPAS39-211ENST00000557658 RIOK3O14730 519 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 ANKRD1Q15327 319 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 UTP14CQ5TAP6 766 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 ADCY9O60503 1353 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 FAM177BA6PVY3 158 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 LIG1P18858 919 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 CDC37L1Q7L3B6 337 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 PDCL2Q8N4E4 241 aa14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
VIPAS39-211ENST00000557658 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms