RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
PRKCH-227ENST00000557599 WWC3Q9ULE0 1092 aa13.52□□□□□ -0.25
PRKCH-227ENST00000557599 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
PRKCH-227ENST00000557599 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
PRKCH-227ENST00000557599 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
PRKCH-227ENST00000557599 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
PRKCH-227ENST00000557599 CARMIL3Q8ND23 1372 aa13.5□□□□□ -0.25
PRKCH-227ENST00000557599 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
PRKCH-227ENST00000557599 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-227ENST00000557599 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
PRKCH-227ENST00000557599 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
PRKCH-227ENST00000557599 KDM3BQ7LBC6 1761 aa13.5□□□□□ -0.25
PRKCH-227ENST00000557599 WDR90Q96KV7 1748 aa13.5□□□□□ -0.25
PRKCH-227ENST00000557599 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
PRKCH-227ENST00000557599 HSPA6P17066 643 aa13.49□□□□□ -0.25
PRKCH-227ENST00000557599 NFIXQ14938 502 aa13.49□□□□□ -0.25
PRKCH-227ENST00000557599 SMC4Q9NTJ3 1288 aa13.49□□□□□ -0.25
PRKCH-227ENST00000557599 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
PRKCH-227ENST00000557599 MS4A1P11836 297 aa13.48□□□□□ -0.25
PRKCH-227ENST00000557599 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
PRKCH-227ENST00000557599 ALDH1L2Q3SY69 923 aa13.48□□□□□ -0.25
PRKCH-227ENST00000557599 ZNF790Q6PG37 636 aa13.48□□□□□ -0.25
PRKCH-227ENST00000557599 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
PRKCH-227ENST00000557599 PCNTO95613 3336 aa13.47□□□□□ -0.25
PRKCH-227ENST00000557599 KIF16BQ96L93 1317 aa13.47□□□□□ -0.25
PRKCH-227ENST00000557599 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
PRKCH-227ENST00000557599 CHRNA5P30532 468 aa13.47□□□□□ -0.25
PRKCH-227ENST00000557599 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
PRKCH-227ENST00000557599 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
PRKCH-227ENST00000557599 MIS18AQ9NYP9 233 aa13.47□□□□□ -0.25
PRKCH-227ENST00000557599 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
PRKCH-227ENST00000557599 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-227ENST00000557599 ZPR1O75312 459 aa13.46□□□□□ -0.25
PRKCH-227ENST00000557599 HOXB7P09629 217 aa13.46□□□□□ -0.25
PRKCH-227ENST00000557599 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.25
PRKCH-227ENST00000557599 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-227ENST00000557599 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
PRKCH-227ENST00000557599 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-227ENST00000557599 PRELPP51888 382 aa13.45□□□□□ -0.26
PRKCH-227ENST00000557599 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
PRKCH-227ENST00000557599 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 VAMP4O75379 141 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 TOMM70O94826 608 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 C8orf58Q8NAV2 365 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
PRKCH-227ENST00000557599 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
PRKCH-227ENST00000557599 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 STARD3NLO95772 234 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 SERPINB2P05120 415 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
PRKCH-227ENST00000557599 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 FRAT1Q92837 279 aaPredicted RBP13.43□□□□□ -0.26
PRKCH-227ENST00000557599 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
PRKCH-227ENST00000557599 CACNA1SQ13698 1873 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 A0A087WZG4 1122 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 BCAR3O75815 825 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 ZKSCAN2Q63HK3 967 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
PRKCH-227ENST00000557599 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 SSH1Q8WYL5 1049 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
PRKCH-227ENST00000557599 RGL2O15211 777 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 KCNQ3O43525 872 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 CACNA1FO60840 1977 aa13.41□□□□□ -0.26
PRKCH-227ENST00000557599 NFKBIEO00221 500 aa13.4□□□□□ -0.26
PRKCH-227ENST00000557599 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
PRKCH-227ENST00000557599 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-227ENST00000557599 PRR5LQ6MZQ0 368 aa13.4□□□□□ -0.26
PRKCH-227ENST00000557599 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
PRKCH-227ENST00000557599 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
PRKCH-227ENST00000557599 SLX4Q8IY92 1834 aa13.4□□□□□ -0.26
PRKCH-227ENST00000557599 A1BGP04217 495 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
PRKCH-227ENST00000557599 PDE3AQ14432 1141 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 KRT24Q2M2I5 525 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 BRIP1Q9BX63 1249 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 PDZRN3Q9UPQ7 1066 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
PRKCH-227ENST00000557599 PLIN1O60240 522 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 APLP1P51693 650 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 RASSF7Q02833 373 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 MRPL50Q8N5N7 158 aaKnown RBP13.38□□□□□ -0.27
PRKCH-227ENST00000557599 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 CHMP4BQ9H444 224 aaKnown RBP13.38□□□□□ -0.27
PRKCH-227ENST00000557599 PTPRCP08575 1304 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
PRKCH-227ENST00000557599 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 LMNB1P20700 586 aa13.37□□□□□ -0.27
PRKCH-227ENST00000557599 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms