RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 DDR1Q08345 913 aa13.64□□□□□ -0.23
PRKCH-226ENST00000557585 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
PRKCH-226ENST00000557585 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
PRKCH-226ENST00000557585 TEX13AQ9BXU3 409 aaPredicted RBP13.64□□□□□ -0.23
PRKCH-226ENST00000557585 IFT57Q9NWB7 429 aa13.64□□□□□ -0.23
PRKCH-226ENST00000557585 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
PRKCH-226ENST00000557585 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
PRKCH-226ENST00000557585 DUSP27Q5VZP5 1158 aa13.63□□□□□ -0.23
PRKCH-226ENST00000557585 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
PRKCH-226ENST00000557585 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
PRKCH-226ENST00000557585 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
PRKCH-226ENST00000557585 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
PRKCH-226ENST00000557585 GNAI1P63096 354 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 EVX2Q03828 476 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
PRKCH-226ENST00000557585 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 POLD1P28340 1107 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 NFIXQ14938 502 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 HLFQ16534 295 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 TBC1D9BQ66K14 1250 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
PRKCH-226ENST00000557585 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 CHPF2Q9P2E5 772 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
PRKCH-226ENST00000557585 ZPR1O75312 459 aa13.6□□□□□ -0.23
PRKCH-226ENST00000557585 TM4SF1P30408 202 aa13.6□□□□□ -0.23
PRKCH-226ENST00000557585 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
PRKCH-226ENST00000557585 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
PRKCH-226ENST00000557585 POLRMTO00411 1230 aaKnown RBP13.59□□□□□ -0.23
PRKCH-226ENST00000557585 NLGN1Q8N2Q7 840 aa13.59□□□□□ -0.23
PRKCH-226ENST00000557585 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.23
PRKCH-226ENST00000557585 HMGB2P26583 209 aaKnown RBP13.58□□□□□ -0.24
PRKCH-226ENST00000557585 AIMP1Q12904 312 aaKnown RBP13.58□□□□□ -0.24
PRKCH-226ENST00000557585 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.24
PRKCH-226ENST00000557585 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
PRKCH-226ENST00000557585 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
PRKCH-226ENST00000557585 CALD1Q05682 793 aaKnown RBP13.57□□□□□ -0.24
PRKCH-226ENST00000557585 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
PRKCH-226ENST00000557585 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
PRKCH-226ENST00000557585 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
PRKCH-226ENST00000557585 IL16Q14005 1332 aa13.57□□□□□ -0.24
PRKCH-226ENST00000557585 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
PRKCH-226ENST00000557585 A0A087WZG4 1122 aa13.56□□□□□ -0.24
PRKCH-226ENST00000557585 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
PRKCH-226ENST00000557585 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
PRKCH-226ENST00000557585 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
PRKCH-226ENST00000557585 G2E3Q7L622 706 aa13.55□□□□□ -0.24
PRKCH-226ENST00000557585 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
PRKCH-226ENST00000557585 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
PRKCH-226ENST00000557585 SERPINB2P05120 415 aa13.54□□□□□ -0.24
PRKCH-226ENST00000557585 GPTP24298 496 aa13.54□□□□□ -0.24
PRKCH-226ENST00000557585 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-226ENST00000557585 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
PRKCH-226ENST00000557585 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
PRKCH-226ENST00000557585 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 VAMP4O75379 141 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 HOXB7P09629 217 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 CHRNA5P30532 468 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 ERBB4Q15303 1308 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 C10orf71Q711Q0 1435 aa13.53□□□□□ -0.24
PRKCH-226ENST00000557585 DPEP1P16444 411 aa13.52□□□□□ -0.25
PRKCH-226ENST00000557585 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRKCH-226ENST00000557585 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
PRKCH-226ENST00000557585 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
PRKCH-226ENST00000557585 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRKCH-226ENST00000557585 BCORQ6W2J9 1755 aa13.52□□□□□ -0.25
PRKCH-226ENST00000557585 PXDNLA1KZ92 1463 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 KCNA3P22001 575 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
PRKCH-226ENST00000557585 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 CD2APQ9Y5K6 639 aa13.51□□□□□ -0.25
PRKCH-226ENST00000557585 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRKCH-226ENST00000557585 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
PRKCH-226ENST00000557585 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
PRKCH-226ENST00000557585 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
PRKCH-226ENST00000557585 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-226ENST00000557585 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 SUSD4Q5VX71 490 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 CLEC4GQ6UXB4 293 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
PRKCH-226ENST00000557585 SLC51AQ86UW1 340 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 KIAA1551Q9HCM1 1747 aa13.49□□□□□ -0.25
PRKCH-226ENST00000557585 ABCC12Q96J65 1359 aa13.48□□□□□ -0.25
PRKCH-226ENST00000557585 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
PRKCH-226ENST00000557585 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
PRKCH-226ENST00000557585 TRMT2AQ8IZ69 625 aaKnown RBP13.48□□□□□ -0.25
PRKCH-226ENST00000557585 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
PRKCH-226ENST00000557585 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms