RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
PSEN1-223ENST00000557511 ZNF496Q96IT1 587 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-223ENST00000557511 TSPYL4Q9UJ04 414 aa10.88□□□□□ -0.67
PSEN1-223ENST00000557511 POTEB2H3BUK9 544 aa10.87□□□□□ -0.67
PSEN1-223ENST00000557511 CYP19A1P11511 503 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-223ENST00000557511 CANXP27824 592 aaKnown RBP10.87□□□□□ -0.67
PSEN1-223ENST00000557511 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
PSEN1-223ENST00000557511 NLGN1Q8N2Q7 840 aa10.87□□□□□ -0.67
PSEN1-223ENST00000557511 BABAM1Q9NWV8 329 aa10.87□□□□□ -0.67
PSEN1-223ENST00000557511 ZNF330Q9Y3S2 320 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-223ENST00000557511 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
PSEN1-223ENST00000557511 ADAMTS7Q9UKP4 1686 aa10.87□□□□□ -0.67
PSEN1-223ENST00000557511 ZNF831Q5JPB2 1677 aa10.86□□□□□ -0.67
PSEN1-223ENST00000557511 APAF1O14727 1248 aa10.86□□□□□ -0.67
PSEN1-223ENST00000557511 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
PSEN1-223ENST00000557511 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
PSEN1-223ENST00000557511 L3MBTL3Q96JM7 780 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-223ENST00000557511 THUMPD2Q9BTF0 503 aaKnown RBP10.86□□□□□ -0.67
PSEN1-223ENST00000557511 MIS18AQ9NYP9 233 aa10.86□□□□□ -0.67
PSEN1-223ENST00000557511 CASZ1Q86V15 1759 aa10.85□□□□□ -0.67
PSEN1-223ENST00000557511 QSER1Q2KHR3 1735 aa10.85□□□□□ -0.67
PSEN1-223ENST00000557511 KCNQ3O43525 872 aa10.85□□□□□ -0.67
PSEN1-223ENST00000557511 PTGER2P43116 358 aa10.85□□□□□ -0.67
PSEN1-223ENST00000557511 FAM9BQ8IZU0 186 aa10.85□□□□□ -0.67
PSEN1-223ENST00000557511 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
PSEN1-223ENST00000557511 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
PSEN1-223ENST00000557511 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
PSEN1-223ENST00000557511 INTS5Q6P9B9 1019 aaKnown RBP10.84□□□□□ -0.67
PSEN1-223ENST00000557511 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
PSEN1-223ENST00000557511 ZBTB1Q9Y2K1 713 aa10.84□□□□□ -0.67
PSEN1-223ENST00000557511 PARP3Q9Y6F1 533 aa10.84□□□□□ -0.67
PSEN1-223ENST00000557511 COL15A1P39059 1388 aa10.83□□□□□ -0.68
PSEN1-223ENST00000557511 IL6STP40189 918 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-223ENST00000557511 GNAI1P63096 354 aa10.83□□□□□ -0.68
PSEN1-223ENST00000557511 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
PSEN1-223ENST00000557511 SMIM5Q71RC9 77 aa10.83□□□□□ -0.68
PSEN1-223ENST00000557511 CHMP4AQ9BY43 222 aa10.83□□□□□ -0.68
PSEN1-223ENST00000557511 FHDC1Q9C0D6 1143 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-223ENST00000557511 SOS1Q07889 1333 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-223ENST00000557511 A1BGP04217 495 aa10.82□□□□□ -0.68
PSEN1-223ENST00000557511 MMP10P09238 476 aa10.82□□□□□ -0.68
PSEN1-223ENST00000557511 EIF4A1P60842 406 aaKnown RBP10.82□□□□□ -0.68
PSEN1-223ENST00000557511 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
PSEN1-223ENST00000557511 USP16Q9Y5T5 823 aa10.82□□□□□ -0.68
PSEN1-223ENST00000557511 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
PSEN1-223ENST00000557511 VIRMAQ69YN4 1812 aaKnown RBP10.81□□□□□ -0.68
PSEN1-223ENST00000557511 NPHP1O15259 732 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 GYS1P13807 737 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 USPL1Q5W0Q7 1092 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 DIEXFQ68CQ4 756 aaKnown RBP10.81□□□□□ -0.68
PSEN1-223ENST00000557511 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 SYT17Q9BSW7 474 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 MFRPQ9BY79 579 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 SRP68Q9UHB9 627 aaKnown RBP10.81□□□□□ -0.68
PSEN1-223ENST00000557511 NARFQ9UHQ1 456 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 ZNF652Q9Y2D9 606 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 TJP1Q07157 1748 aa10.81□□□□□ -0.68
PSEN1-223ENST00000557511 CICQ96RK0 1608 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 EIF2S2P20042 333 aaKnown RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 EIF5P55010 431 aaKnown RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
PSEN1-223ENST00000557511 IFT57Q9NWB7 429 aa10.8□□□□□ -0.68
PSEN1-223ENST00000557511 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
PSEN1-223ENST00000557511 COL5A3P25940 1745 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
PSEN1-223ENST00000557511 SIPA1L3O60292 1781 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-223ENST00000557511 TUBGCP6Q96RT7 1819 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 PRAMEF22A3QJZ6 481 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 CHL1O00533 1208 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 CCDC27Q2M243 656 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 TBC1D2BQ9UPU7 963 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-223ENST00000557511 UBR2Q8IWV8 1755 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
PSEN1-223ENST00000557511 DLG5Q8TDM6 1919 aa10.78□□□□□ -0.68
PSEN1-223ENST00000557511 MYL6BP14649 208 aa10.78□□□□□ -0.68
PSEN1-223ENST00000557511 GPR162Q16538 588 aa10.78□□□□□ -0.68
PSEN1-223ENST00000557511 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
PSEN1-223ENST00000557511 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
PSEN1-223ENST00000557511 HOXB7P09629 217 aa10.77□□□□□ -0.69
PSEN1-223ENST00000557511 PIP4K2AP48426 406 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-223ENST00000557511 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.69
PSEN1-223ENST00000557511 SETDB2Q96T68 719 aa10.77□□□□□ -0.69
PSEN1-223ENST00000557511 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
PSEN1-223ENST00000557511 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 CLEC4GQ6UXB4 293 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 MS4A4AQ96JQ5 239 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 MBIPQ9NS73 344 aa10.76□□□□□ -0.69
PSEN1-223ENST00000557511 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
PSEN1-223ENST00000557511 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms