RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 CNTROBQ8N137 903 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 FER1L4A9Z1Z3 1794 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 PPP1R42Q7Z4L9 355 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 HOMER1Q86YM7 354 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 CACNA1FO60840 1977 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
SV2B-206ENST00000557410 IP6K1Q92551 441 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 TMX3Q96JJ7 454 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 SRGAP3O43295 1099 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 CYP2E1P05181 493 aaPredicted RBP9.41□□□□□ -0.9
SV2B-206ENST00000557410 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
SV2B-206ENST00000557410 LRRC37A3O60309 1634 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.9
SV2B-206ENST00000557410 WDR33Q9C0J8 1336 aaKnown RBP9.4□□□□□ -0.9
SV2B-206ENST00000557410 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 STAP2Q9UGK3 403 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 RAB11FIP3O75154 756 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 HMGN5P82970 282 aaKnown RBP9.4□□□□□ -0.9
SV2B-206ENST00000557410 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
SV2B-206ENST00000557410 CCDC73Q6ZRK6 1079 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 SDF4Q9BRK5 362 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
SV2B-206ENST00000557410 NWD1Q149M9 1564 aa9.4□□□□□ -0.91
SV2B-206ENST00000557410 CPLX1O14810 134 aa9.4□□□□□ -0.91
SV2B-206ENST00000557410 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.91
SV2B-206ENST00000557410 SSH3Q8TE77 659 aa9.4□□□□□ -0.91
SV2B-206ENST00000557410 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 ANXA1P04083 346 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
SV2B-206ENST00000557410 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
SV2B-206ENST00000557410 FSD1Q9BTV5 496 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 PI4KAP2A4QPH2 592 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 PI4KAP1Q8N8J0 262 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 DNAAF4Q8WXU2 420 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 CCDC34Q96HJ3 373 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 ANAPC15P60006 121 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
SV2B-206ENST00000557410 FMNL2Q96PY5 1086 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
SV2B-206ENST00000557410 KCNQ3O43525 872 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 DDX58O95786 925 aaKnown RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 NBPF7P0C2Y1 421 aaPredicted RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 AOX1Q06278 1338 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 CLCN1P35523 988 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 TPD52L1Q16890 204 aaPredicted RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 ZSCAN23Q3MJ62 389 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 KIF1BPQ96EK5 621 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 ZDHHC9Q9Y397 364 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 STK3Q13188 491 aa9.38□□□□□ -0.91
SV2B-206ENST00000557410 CWC27Q6UX04 472 aaKnown RBP9.38□□□□□ -0.91
SV2B-206ENST00000557410 LTN1O94822 1766 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 RIC3Q7Z5B4 369 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 RBM27Q9P2N5 1060 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 MARF1Q9Y4F3 1742 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 PES1O00541 588 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 PDCP20941 246 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 LARP1BQ659C4 914 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 RASSF8Q8NHQ8 419 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
SV2B-206ENST00000557410 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 APPP05067 770 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 HOXB7P09629 217 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 PSMA5P28066 241 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
SV2B-206ENST00000557410 CCDC192P0DO97 292 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 POLA2Q14181 598 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 BEND3Q5T5X7 828 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 CPLX2Q6PUV4 134 aaKnown RBP9.36□□□□□ -0.91
SV2B-206ENST00000557410 ZNF445P59923 1031 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 GPT2Q8TD30 523 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 NGLY1Q96IV0 654 aa9.36□□□□□ -0.91
SV2B-206ENST00000557410 CUL4AQ13619 759 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 AMOTQ4VCS5 1084 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 JAKMIP1Q96N16 626 aaKnown RBP9.35□□□□□ -0.91
SV2B-206ENST00000557410 SIL1Q9H173 461 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 DBF4Q9UBU7 674 aaPredicted RBP9.35□□□□□ -0.91
SV2B-206ENST00000557410 TPM3P06753 285 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 KRT85P78386 507 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 SYNE3Q6ZMZ3 975 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 PI4K2BQ8TCG2 481 aa9.35□□□□□ -0.91
SV2B-206ENST00000557410 INTS4Q96HW7 963 aaKnown RBP9.35□□□□□ -0.91
SV2B-206ENST00000557410 IL25Q9H293 177 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms