RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SCRIBQ14160 1630 aa7.26□□□□□ -1.25
CHD8-212ENST00000557329 MSTNO14793 375 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
CHD8-212ENST00000557329 ADAM23O75077 832 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 PLA2G4EQ3MJ16 856 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 ARSJQ5FYB0 599 aaPredicted RBP7.25□□□□□ -1.25
CHD8-212ENST00000557329 BICDL1Q6ZP65 573 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 ZNF295-AS1Q8N0V1 137 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 VTI1AQ96AJ9 217 aa7.25□□□□□ -1.25
CHD8-212ENST00000557329 ATXN7L1Q9ULK2 861 aaPredicted RBP7.25□□□□□ -1.25
CHD8-212ENST00000557329 CUX2O14529 1486 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 EML1O00423 815 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 LAMC2Q13753 1193 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 DBN1Q16643 649 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
CHD8-212ENST00000557329 SCG3Q8WXD2 468 aaKnown RBP7.24□□□□□ -1.25
CHD8-212ENST00000557329 DCAF5Q96JK2 942 aa7.24□□□□□ -1.25
CHD8-212ENST00000557329 TSPAN10Q9H1Z9 355 aaPredicted RBP7.24□□□□□ -1.25
CHD8-212ENST00000557329 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.23□□□□□ -1.25
CHD8-212ENST00000557329 XP32Q5T750 250 aa7.23□□□□□ -1.25
CHD8-212ENST00000557329 SPOCK3Q9BQ16 436 aa7.23□□□□□ -1.25
CHD8-212ENST00000557329 C2orf49Q9BVC5 232 aaPredicted RBP7.23□□□□□ -1.25
CHD8-212ENST00000557329 GPAMQ9HCL2 828 aa7.23□□□□□ -1.25
CHD8-212ENST00000557329 PCDHGC4Q9Y5F7 938 aa7.23□□□□□ -1.25
CHD8-212ENST00000557329 ITGB2P05107 769 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 BCRP11274 1271 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 WEE1P30291 646 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 MAP2K3P46734 347 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 RHPN1Q8TCX5 695 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 COL26A1Q96A83 441 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 LRRC4BQ9NT99 713 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 TIMELESSQ9UNS1 1208 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 CNTNAP5Q8WYK1 1306 aa7.22□□□□□ -1.25
CHD8-212ENST00000557329 IGF1RP08069 1367 aa7.21□□□□□ -1.25
CHD8-212ENST00000557329 A0A1W2PNR3 127 aa7.21□□□□□ -1.26
CHD8-212ENST00000557329 PTCD1O75127 700 aaKnown RBP7.21□□□□□ -1.26
CHD8-212ENST00000557329 ATP4AP20648 1035 aa7.21□□□□□ -1.26
CHD8-212ENST00000557329 B4GALNT3Q6L9W6 998 aa7.21□□□□□ -1.26
CHD8-212ENST00000557329 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 MX2P20592 715 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 RTN1Q16799 776 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 CDCA8Q53HL2 280 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 FAM182BQ5T319 152 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 ZDHHC1Q8WTX9 485 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
CHD8-212ENST00000557329 GTPBP3Q969Y2 492 aaKnown RBP7.2□□□□□ -1.26
CHD8-212ENST00000557329 ZIC5Q96T25 663 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 RUBCNLQ9H714 662 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 EFCC1Q9HA90 598 aa7.2□□□□□ -1.26
CHD8-212ENST00000557329 SHROOM4Q9ULL8 1493 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 ATXN7O15265 892 aaPredicted RBP7.19□□□□□ -1.26
CHD8-212ENST00000557329 PROCP04070 461 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 ALDH16A1Q8IZ83 802 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 NEDD1Q8NHV4 660 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 CHMP7Q8WUX9 453 aaPredicted RBP7.19□□□□□ -1.26
CHD8-212ENST00000557329 PHACTR1Q9C0D0 580 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 USTQ9Y2C2 406 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 USP3Q9Y6I4 520 aa7.19□□□□□ -1.26
CHD8-212ENST00000557329 C21orf2O43822 256 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 IER5Q5VY09 327 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 ACDQ96AP0 544 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 ZCCHC2Q9C0B9 1178 aaKnown RBP7.18□□□□□ -1.26
CHD8-212ENST00000557329 C1orf115Q9H7X2 142 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 C11orf16Q9NQ32 467 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 AVENQ9NQS1 362 aaPredicted RBP7.18□□□□□ -1.26
CHD8-212ENST00000557329 ZMIZ1Q9ULJ6 1067 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 MTMR7Q9Y216 660 aa7.18□□□□□ -1.26
CHD8-212ENST00000557329 GPR25O00155 361 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 EPB42P16452 691 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 TXLNAP40222 546 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 NEUROD1Q13562 356 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 TBCELQ5QJ74 424 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 MYO19Q96H55 970 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 NDFIP2Q9NV92 336 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 GDF2Q9UK05 429 aaPredicted RBP7.17□□□□□ -1.26
CHD8-212ENST00000557329 PARP3Q9Y6F1 533 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
CHD8-212ENST00000557329 FGFR3P22607 806 aa7.16□□□□□ -1.26
CHD8-212ENST00000557329 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
CHD8-212ENST00000557329 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
CHD8-212ENST00000557329 TNP2Q05952 138 aa7.15□□□□□ -1.26
CHD8-212ENST00000557329 FAM69CQ0P6D2 419 aa7.15□□□□□ -1.26
CHD8-212ENST00000557329 UBAP2LQ14157 1087 aaKnown RBP7.15□□□□□ -1.26
CHD8-212ENST00000557329 GALNT6Q8NCL4 622 aa7.15□□□□□ -1.26
CHD8-212ENST00000557329 MARK1Q9P0L2 795 aa7.15□□□□□ -1.26
CHD8-212ENST00000557329 CXXC1Q9P0U4 656 aaPredicted RBP7.15□□□□□ -1.26
CHD8-212ENST00000557329 TGFBR3LH3BV60 316 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 SUPT5HO00267 1087 aaKnown RBP7.14□□□□□ -1.27
CHD8-212ENST00000557329 OIP5O43482 229 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 BNIP3LO60238 219 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 BMP4P12644 408 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 KCNQ4P56696 695 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 C11orf91Q3C1V1 193 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 GOLGA6L1Q8N7Z2 621 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 STK32AQ8WU08 396 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 C7orf43Q8WVR3 580 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 SUSD3Q96L08 255 aa7.14□□□□□ -1.27
CHD8-212ENST00000557329 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms