RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, human

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-215	ENST00000556959	DDN	O94850	711 aa	Predicted RBP	10.92	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	STARD3NL	O95772	234 aa		10.92	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	RALBP1	Q15311	655 aa		10.92	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	MKRN1	Q9UHC7	482 aa	Known RBP	10.92	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	HTATSF1	O43719	755 aa	Known RBP	10.91	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	VEGFA	P15692	232 aa	Predicted RBP	10.91	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	PRR5L	Q6MZQ0	368 aa		10.91	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	RTF1	Q92541	710 aa	Known RBP	10.91	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	SCN7A	Q01118	1682 aa		10.91	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	NBPF26	B4DH59	902 aa		10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959		H0YIN7	160 aa		10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	IL6ST	P40189	918 aa	Predicted RBP	10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	NFE2L2	Q16236	605 aa		10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	NBPF10	Q6P3W6	841 aa	Known RBP	10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	NBPF15	Q8N660	670 aa		10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.9	□□□□□ -0.66
SIPA1L1-215	ENST00000556959	CAMTA2	O94983	1202 aa		10.89	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	SNRPA1	P09661	255 aa	Known RBP	10.89	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	TAF7	Q15545	349 aa	Predicted RBP	10.89	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	BCOR	Q6W2J9	1755 aa		10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959		A0A087WZG4	1122 aa		10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	FAM177B	A6PVY3	158 aa		10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	FMR1	Q06787	632 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	ERFE	Q4G0M1	354 aa		10.88	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	ARFGEF2	Q9Y6D5	1785 aa		10.87	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	ZNF541	Q9H0D2	1346 aa		10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	DLG5	Q8TDM6	1919 aa		10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	FOXN1	O15353	648 aa		10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	EIF4A1	P60842	406 aa	Known RBP	10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	CCDC146	Q8IYE0	955 aa		10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	RRP7A	Q9Y3A4	280 aa	Known RBP	10.86	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	MAPK8IP3	Q9UPT6	1336 aa		10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	KDM3B	Q7LBC6	1761 aa		10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	TMPO	P42166	694 aa	Known RBP	10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	PRPF40B	Q6NWY9	871 aa	Known RBP	10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	DZIP3	Q86Y13	1208 aa	Known RBP	10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	BRIP1	Q9BX63	1249 aa		10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	COL4A5	P29400	1685 aa		10.85	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	SRGN	P10124	158 aa		10.84	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	RIPK4	P57078	832 aa		10.84	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	CHADL	Q6NUI6	762 aa		10.84	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	C7orf43	Q8WVR3	580 aa		10.84	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	ADAMTS8	Q9UP79	889 aa		10.84	□□□□□ -0.67
SIPA1L1-215	ENST00000556959	NEFM	P07197	916 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	VEGFB	P49765	207 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	HLF	Q16534	295 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CNBD1	Q8NA66	436 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PNISR	Q8TF01	805 aa	Known RBP	10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TAOK3	Q9H2K8	898 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TRIM35	Q9UPQ4	493 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	SCN4A	P35499	1836 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NUP98	P52948	1817 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	LTBP1	Q14766	1721 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TAF1	P21675	1872 aa		10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.83	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	ITGBL1	O95965	494 aa	Predicted RBP	10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PDE6B	P35913	854 aa		10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	EAPP	Q56P03	285 aa	Predicted RBP	10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	DPY19L2	Q6NUT2	758 aa		10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	LRP10	Q7Z4F1	713 aa		10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	SETDB2	Q96T68	719 aa		10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PNN	Q9H307	717 aa	Known RBP	10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PASK	Q96RG2	1323 aa		10.82	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	ADAMTSL1	Q8N6G6	1762 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PDIA6	Q15084	440 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NEUROD2	Q15784	382 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	KRT24	Q2M2I5	525 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CCDC184	Q52MB2	194 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	MAP1S	Q66K74	1059 aa	Predicted RBP	10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CLEC4G	Q6UXB4	293 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TTLL7	Q6ZT98	887 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NGEF	Q8N5V2	710 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TSPYL4	Q9UJ04	414 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	RNF123	Q5XPI4	1314 aa		10.81	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	LAMB4	A4D0S4	1761 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	TCERG1	O14776	1098 aa	Known RBP	10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NPHP1	O15259	732 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	PROSER3	Q2NL68	480 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	STYK1	Q6J9G0	422 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NUTM1	Q86Y26	1132 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	ZNF428	Q96B54	188 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	RUNDC1	Q96C34	613 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	MASTL	Q96GX5	879 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CREBZF	Q9NS37	354 aa		10.8	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CASP8AP2	Q9UKL3	1982 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CNTNAP1	P78357	1384 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CHL1	O00533	1208 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	RGL2	O15211	777 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	ANXA1	P04083	346 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	MYL6B	P14649	208 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	LBX1	P52954	281 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	C3orf67	Q6ZVT6	689 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NPM2	Q86SE8	214 aa	Known RBP	10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	CNKSR1	Q969H4	720 aa		10.79	□□□□□ -0.68
SIPA1L1-215	ENST00000556959	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms